Detailed information of SKAU_T00167910 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00167910ATP SYNTHASE GAMMA-RELATEDCM056380.16853539368588421-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013KH_1KH domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan
PF04802PP4R3Phosphatase 4 regulatory subunit 3FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR006887DomainSerine/threonine-protein phosphatase 4 regulatory subunit 3-like, central domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR051137FamilySerine/threonine-protein phosphatase 4 regulatory subunit 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR23318ATP SYNTHASE GAMMA-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0006470Biological Processprotein dephosphorylationInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0030289Cellular Componentprotein phosphatase 4 complexInterproscan
GO:0072542Molecular Functionprotein phosphatase activator activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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