Gene detail

Detailed information of SKAU_T00129580 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00129580	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	CM056379.1	42030327	42053415	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00129580

GTTTCACAGGGGCATGGTAACCTCTTGCATGTGACATACGTTTCAAAAAGCGTCGGGTGTACATGTACACTGTTCAAGGACTGAAAAACAAAAATCTTGTAAACGTGCAGCGTCATGCCCTCTCAGTTACGAAAGCTTGTGCAGACTAGTATTACTTGAGAGCCTTGGAAGTTAAGAGTGACTGTGCAACATTCGACGCTACTCTGCCAACTCTGGCAAAAGACGGCCATCAAGTTGATTGGCAGCGAGGAAGTCCAGTGCAAAAAACTGCGTGCTTTCCAGGGGGCGGGTGCAGGGAAGTATCCACTCTGGTCGGTTGCGGTAACATTGTTGTGGAGTGACGTCACAGCTGGAAAATGAAGGCGCAGAGGCAGCCATTACTGGAGGCTCTGTAATTATTAAATCCAAATAAATACTGGTGGAAAACTTCCATGGCAAGAACCACTAGTCAAATTTATGATGCTGTTCCCATTCAATCCAGCGTTGTCATCTGTTCCTGCCCACATCCATCAATGGTAGTAAATCACCCAGACTCCAGCTCGCCACTTGCTGTCCCGGGCGCAAGTAGCGGCCACTGTCCCAACATGGAGGGCCCCACCACCGAGCCCAGGGCCTCCCCCAAATCTCCCGACAAGGGCACCGAACCGCGGCCACAATCAATACAGCCGCGCAAGAAGAGGCCGGAGGACTTCAAATTTGGGAAAATTCTTGGAGAAGGCTCCTTTTCGACAGTTGTACTGGCAAGAGAACAGTCAACGGGAAAGGAATATGCAATTAAAATCCTGGAAAAACGGCATATCATGAAGGAGAACAAGGCACAATATGTGAAAAGAGAAAGAGATGTTATGTCCGACCTAGATCACCCATTCTTTGTCAAACTCTACTTCACATTTCAAGATGAGGAGAAGCTGTATTTTGGCCTTAGCTATGCTAAAAATGGAGAGCTGCTTAAATACATTCGCAAAATAGGTTCTTTTGATGAAACGTTGTACTAGATTCTACTCGGCTGAAATAGTTTGTGCTCTTGAATATTTGCATTCAAAGGGGATAATTCACAGggaccTTAAACCAGAGAATATTTTATTGAGCGAGGAAATGCACATCCAGATAACAGATTTTGGAACAGCAAAACAGTTACCTTCCGATAGAAAGCAAGcAAGAGCAAACTCGTTTGTAGGAACTGCACAGTACGTTTCCCCTGAACTGCTGACAGAGAAATCTGCCTGCAAAAGctctGACCTCTGGGCCTTTGGTTGTATTATCTACCAGTTGGTGGCAGGTTTACCACCATTTAGAGCTGGGAATGAGTACCTAATATTCCAGAAGATAATAAAGCTGGAATATGAGTTCCCAGAGAAATTCTTCCCCAAAGCAAAGGATCTTGTCACACAGCTTTTGTCCTTGGACTCTTCCAAAAGGATAGGCTGTGAGGAGATGGGTGGGTACGACCCCCTAAAGGCTCATCCTTTCTTCGAGACCATCTCTTGGGAGAACCTCCACCTGCAGACACCCCCCAAACTCACCCCCTACCTGCCCGCCATGTCTGAGGATGACGAGGACTGCTATGGAAACTACGATGACCTCCTCAGCCAGTTCAGCAGCATGCAGGTGGCCCAGTCCAGCTCCTCACACTCCCTGTCTGTACATGAGTCGACCCCTCCTCAGAGATCCAGCAGCAACATCGAGCAGTACATCCACGACCTGGACAACAACTCCTTCGAGCTGGACTGCAGTTTTTCTAACGAGGAGAAACAGCTGCTGCTGGAGAAGCAGACCAGTGGGAACCCCTGGCACCAATTCGTAGAAAATAATTTAATACTCAAGATGGGGCCAGTGGACAAACGGAAGGGACTGTTTGCTCGTCGTCGTCAGCTGCTCCTGACAGAGGGGCCCCACCTTTACTACGTGGACCCAGTCAACAAGGTCCTGAAGGGGGAGATCCCCTGGTCCCCAGAGCTGCGCCCAGAAGCTAAAAACTTCAAGACTTTCTTTGTTCACACGCCCAACAGGACATATTATCTAATGGACCCTAGTGGAAATGCTGACAAATGGTGCAAGAAGATTCAAGAAGTGTGGCGGAAGATTTACCACAAGCACCAAAACACTGGCATGTAGGCTTAGCGCCCAGAAGGGCTGACTAGCTCCTGCTATGGCCGGACCTCCCTTCCGCGTCTGAGGCTCGTCAGCACAGAACCATCTGCCCTAGTGCCCATCAGCACCACGGTTTTAACAACTCTTTTAAGGCTGGCTTCTTTACTTTGTTTTctttctgtaattaaaaaataaaaaataaataggacAAAAACAGACATAAGTGGTATTCAGGGTTGCTTTGCTTGTTCTCTGTGCTATTGAAGCTTCAAATGCATAAAGTCACGTGCGAATGAAGATTCAGCTGTCGTGCATTTCTGCTCTCCATCTCCAGAAAACTGTGAGAGAAAATGACAAGAAGCAGCCTTGTGTGTCAACTGCTTTTTTTGGATTAAAGTAGAGCTCCACGCATACACGCACCCAGAAAATGTAGAGCACAGTCCTGGTTGGGggttgggtgtgtgtgggggggggggggggcaggggtctTTGTTCCTGCGACTTCTCATTTTGTAATCACAGCTGTCGGGGAGCTGTAAACAGAGAAACAAGCATACAGTATGTTTTCCTGTTTTATTTCCCTTCCTCTTTTCTGGCTTTTTTCAATATCAGCAGCTTGCAGTCCGGTCAGTGATGGCTCACTTCATTTTGTTTTTAGAAATGATCACAGATTTACAGTGGTACTTACATTTAGCATAGGTGTCTGTGCTTAAGTAGGGGTTCTGGGTAGACTGACAATTTTCTGTCATTAATGctataaaaacacaaacaaaaaatgcaagtggaaaaaaaaaaacgtaacctTGCTTGTAATTTTGTTCACCATAATACTTGCGTAGTCTCCCTGCATGGCCAGTTGGAAATTGCAAATCCTGTAATTTAGCCTCTTGTGTTTTTCAAAAGACACAGGGGCATCACAGATCTGTTGCTGAGAGTAGTTGACTAAAGTTAAGATGGGTATTTTGACTGAGTTGACAACCAGAGATCATATATGTAAAAGATTTAGCTGTACTTTGCCAGTACCTGGCATTTTTAACTGcagtttataatcaatataatttttTGATTTGTTTTGGACAGCATGTTAATGTTGAGTTTGTTCTGTCCAAGAATTAAATCATATGCTGTCCACCATGTGTAGAACAGCTCTAGTATAGAAGTGTACTGTTCAACAgaattattactactattactagGAAGCAATTGCAGCAGAACTCTTCAGTAGAAGTGCAGCTTGACACCTTTGCCACTTTTAGATGATGATGTTTTTGACCTGTACAGTTCACGCCCAGTTTACAAAGGCACAAATGTCCACTAACTTGGGTCTCTAAATCTGACCCAGCCCATATTTCAATTTGGTTTAGATTTTTCTCTCTTTTATTTGATGACGCACTGCGAGAGGTCCTTAATGGACTGGCTATAGCCATGTTCTTGCAGTTGAGTCAGTCTGCCATGAGTGACTGTGTGTATAGGGGCAGCCTCAGACTATTGTTTAATCAATGTGTTTGGGTGTCAGCAATATGCTATTTGGGCCAAATAGCGGTTTAAATTGCTGTATCTACCTTCAAAACAAGCAAGTACTACAGGAAGTGTTTATTTTTCTCTTGCTAGGACATTTTTAtgttagggtttttttttgttttggtttttttttaaatcaagttgGCGGCAGTCGGTTACATTGTGTATTTAATACTCTACCTGGTTCGTAACCGACTAGAACTGTGATGTACAGATGACGTATTATTGAAATCTAAAGCAAGTAATGCAATGATATTAGGATACAcactttttgtatttttattcttGTATAAGGTTATTTGCTGGCTATTGTTTAGCCTCTAGTTCATTCTGTGTTATTTAAATTCTAATATATGAATCATATTTGGATTGAAGTCATGTTCAGGGGCCATGTTGTGTATGTATTGAGATGTAAAGCCTTTGAATGTGAATAATTATTGTAAACTATGATAttttacagcttttttttttcttactatATTATATACATTTTCTATTTGGTCAGTGATTTAATCATATTTCTCATAATTTAATGAATCTGTTTCTTCTTTTTCCCATTATTTGTGCGCTAGGTATAGTTGTTGAATGATGAATTTTCCACGTAATGCTTGGTAGTCCTGTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF14593	PH_3	PH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR033931	Domain	PDK1-type, PH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24353	CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004691	Molecular Function	cAMP-dependent protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005952	Cellular Component	cAMP-dependent protein kinase complex	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-