Gene detail

Detailed information of SKAU_T00128650 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00128650	CENTROMERE PROTEIN E	CM056379.1	37420020	37458486	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00128650

ATGAAAGACCTCCCAGGGGAGTCAAAGGACCATCAGCTAACGGTGGCTCTTCGTATTCGTCCACTCAATGAGGCTGAAATAGAGGAAGGGGCTACCATCGTAGCTCACAAACTGGATGATCAGATGGTTGTCCTTATGGATCCCTGTGAGGACCCAGATGACATTCTGCGTGCAAATCGGTCGAGAGGGAAAACATACATGTTTGATGTGGCATTTGATTTCACAGCTACGCAGGAAGATGTTTATGTGGCAACCACAAAGAATTTAATTGAAGGTGTTATTTCGGGTTACAATGCCACTGTCTTTGCATATGGACCAACAGGTGCTGGAAAGACTTACACAATGCTGGGGCTGGATTCTGAGCCAGGGATCTATATTCGTACCTTGAATGACCTTTTCAAAGCAATTGAGGCAGGCAACGAAGATATGAACTGCACCGTCTACATGTCATATCTGGAGATATACAATGAGATGATTCGGGACCTTCTGAACCCTGCGTCTGGGTATCTGGACCTGCGAGAGGATGCCAAGGGAGAAATCCGTATTGCAGGCATCACTGAGTTCTCCACCAACAATGCAAAAGAGCGTACGCAGAAGATAATGCAGCTGCTTACAAAAGGGAACAAACAGCGGACCCAGGAGCCCACCGCCGCCAACAAAACGTCGTCGCGCTCTCACGCCATCCTACAAGTCACAGTCAAGCAGAAGAACAGAGTGAAGAACATCAACGAGGAGGTGCGAGTGGGGAAACTGTTCATGGTCGACCTGGCCGGGACAGAGAGGGCCTCCCAGACACAGAATCGTGGGAAGAGGATGAAGGAAGGAGCACATATTAACCGCTCCCTGCTTGCCTTGGCCAACTGTATCAATGCCCTGAGTGAGAAAGGTGGTAAAGGTGCCCAATTTGTCAATTACCGGGATAGCAAACTGACTCGACTGCTTAAGGATGCTCTTGGTGGAAACAGTAGAACCGTGATGATCACTCACATTAGTCCTGCCAGCACCAACTTTGAGGAGTCCAGAAACACACTGATCTATGCAGACAAGGCCAAAAACATAAGGACTAAGGTAAAGCGCAACCTGCTAAATGTCTCTTACCACATAGCCCAGTACACCAGCATCATTGCAGACCTTCGCCAAGAGATTGAGAGATTAAGAGCCAAGATAGATGAACAGGGTCAAGAAAACAGGAAAGGCGACAGGGCAGACATTCGTGATGTCCAAGCGGAGGTCCAGCAGCACTCTGCCCAGTACAGCCGCAGGGAGCTGGGCCGGCTGCGGGAACAGCTGCTCTCTGCTTTCCGGGAGCAGATGGAGATCCGTCGCAGCCTGGTGGAGCTGGAGAACTGTAACATGGAGCTGCATATCGACACCTCCAGACACCTGGTCACCATCTCAGACTGGGAAAGGGAGAGGGCCCGGTGTGCTAAGAAATGGAGGGATGAGAGGCACAGAGAGGAGGTGGATAAAGACGGAGAAGAGGAGCGGGAGCGGGACAGCGGGGGCGAGGACACGGACTCCACCGAGCCCCATGACGTCACCGCGGCTCGGGAGGAGATCGGCACGCTGCTGGCCGAGCAGAGGAAAACCATGGCGCTAAAGTCAGACCTGGAGGAGAAGCTCACAAGCATGAAGCTGAAGTCCTCCAAGATGGAGGAGCTGCTGCCGAAGCGGATTAGCAACGAGGAGCAGCGGGAGATCCTCACGCTCCTCTGCAGAGtgcacgagctggaggtggagaacACGGAGATCCAGTCCGTGGTGCTGTGCAAGGAGAACCTGATGCGCACGAAGGACTTCGTCATCCAGCGCTACGAGCATCGCAGGGCGCTGTGCGACGAGATAATACAGCGGCAGAGAGCCATCATTGAAGACCATCAGATCCCTGTTCCCCCTGAGCTGGATGAGCTCTATGCGTTGTATTACAGTGAACTGAATGATGGAAGCATCGACCAAGTTCTCAGTCTCCATACAATTACATCCAGCACAATGAGGGATGGATCAATATTAAATGTAGCAAGGCAGCTGAACCTTGGTGATTTGATTCCTGACACGGATAAAGGAGAGCTCAGCCCAAGGGTAGCTGTGCAAGAGAGTAGGACAACTCTAAATAAGTTTCCACCTACTTCAGTAGGTGATCATGAAAGTGAAAGTAATAAGGTTTTCAAATCCACTTCAAAATCCCATCAGATGAAACACGGCCACAATTCATCCAGCCCACCTCCATTAAATCAGCGCCCCAACGGGAAGGACAGCGCTCGCCAGTCTGAACAGGTCAGCCCAGAGACCATGAAGGAGATTGTGTTGGATACGAAGAGCATCTCCGTGATCGCGGCCAAGCGGCGATCGCACATTCAGGCCATGGAGCCGGCCAGTAGGCTGTCCATGGCCAAAGAGAGGAGCCTGATGTCAGTGCAGTCTCtggaggaaggggaggaggcCTCAGAGTCCCAGCGCCCGGTTAGCATCGACAACCTGGACCTCTCCACCCCCGATGAGCTGGAGGCCAGGAAGGCTCCACCCCGGGCTCCAGGGAGCTCGCAGTCCACCTCCAAGAAGGACCTGCCGAAAGCCAGCAGGAGGAACAACTCCATCGAGAGGCGCGCGCGAAAGAAGCGGTCCAAGTCTTTTGAGGTCAACTCAAAGAGGACATTCAAGATCAGTGCCTCCAGAAATCCAGGTCTTGAAAGTATTTCAGACAACagactacattcacaaaatgcAAACCAAATCTTGCACAAGAATGTGGGAAATCCTTCAACACCACCAGCAACCAAGGTTAAATATCCCATCTCTCATCACACAGGGGAAAGCCAAATCCAGAAGCTGGAGATGCATGGTACTCCACCCAGCACCATTCACCAGAAGAATGCAGAGGGAAGAGGTCAGACCATCTACAAACGAGTCAGAGGCCCTTCAGATATCTTGAGCAAAAATCAGTTGCTTCTACAGCCTGGGAATTTTAAACGAACAGCCAATGCCAATGCAAGACATAAGGGAACAGCTGAAAGCAACATCAAAACAAAAGCTCATACATCCGTCCGCTCTACCATTGCTGCCGACACCTCTAACAGTCAAGATAGCGGGGAACCTGGAAACGGAGGGCCTGCACACTGGAACAATGCTCTCCTCATGTGGAGATGGTGTCAGTCCACCTCCAAGCACAAAGCATATGACGACAAGGGTAACTCCTTCCTGTCGGACATTGATGCCTTCATTAACCAGTTCCTGGAGGGCACCGTTGAGCCCAGTCAGCAAGCGAAGGAGGATGTTGCCCCAGAAACATTGCACAACCAGTCTGGGGAAGCGGGGAAGCGGGAAGAGAAGTACGTTCCGAGGCGGGAGTGGAAGGTCCACCTGACTCCCATCTCTGTAGAGATGAGGCAGAGGCAGGAAGACAGGAAGCAGCTGATCCACGACCTCTGCACAAACAGCACCCTTGACTTCCTGGGAAAGAACAGGACATTCGATGACATCCCCAACAAGGACCTGGACCACCTGATTGTGGATGACCGGCACGGAATCATTTACTGTTACGTGCCAAAGGTAGCCTGCACCAACTGGAAGCGCATCATGATCGTGCTGAGCGAGAGTCTCTTAGTCGACGGGGCTCCCTACCAGGACCCTCTGGACATTCCACAAGAGCACATCCACAACAGCAGCCTCCATTTTACCTTCAACAAGTTCTGGAAGCGATACGGAAAGTTCTCTCGACACCTGATGAAGATCAAGCTGAaaaaatacaccaaatttatgTTTGTGAGGGACCCTTTTGTCAGGCTGATTTCCGCATACAGGAACAAATTTGAGCAGGTGAATGAAGAGTTTTACAAAAGATTTGCCGTCATCATGCTGAGAAGGTACGGCAATTACTCCGACCCCCCTGCCTCAGTTGTTGATGCATTTGCGGCTGGGATTCGCCCTTCGTTCTCACACTTTGTCCAGTATTTATTAGACTCCCAGACTGAAAAAGAGATGCCCTTCAACGAACACTGGCGCCAGGTGTATCGCCTGTGTCATCCCTGCCAAATCAATTATGACTTTATTGGGAAGTTGGAGACCTTGGACGAGGACGCAGAACACTTGCTCCGCATTCTTCGGGTGGATAATATTGTCCAGTTCCCTGCCAGCAACCGCAATAGAACAGTTAGCAGCTGGGAGCAGGATTGGTTTGCCAAAGTCCCCTATGAATTGAGACGAAAGCTCTACAAGCTTTATGAGGCTGACTTCAAACTTTTTGGATATTCCAAGCCTgaagaactgttacattag

Transcript

SKAU_T00128650

GTTTTGTGAAGTGTGCCACAGTTATCTTTCTGTGTATGTGTAACGAACTAACTAGCTCGCTACACACTGTGAGAATCGTGGTGTGAGCAGCTGGCCTGTAAATGTGTGTGCTTGGTGATGAGAATCATTCTCACCTTCCTGCTGCTGGCTTTGCTGGAAGCGACAGACGAACCTTCATTTGAACAGCCTATTAGCGGCTTAACGTTACGCATCCAGCAAGAGGATTAAGGAGACTTGTTCCAACATATCGCAGGAACAGTTTACTCGGTAGGCTAACTAGCTTGGTAACTAGTTATTTAAGTAGGGAAAGACAAGTATGGAGTAGAATAAACACGAATCCAGGACAACATGAAAGACCTCCCAGGGGAGTCAAAGGACCATCAGCTAACGGTGGCTCTTCGTATTCGTCCACTCAATGAGGCTGAAATAGAGGAAGGGGCTACCATCGTAGCTCACAAACTGGATGATCAGATGGTTGTCCTTATGGATCCCTGTGAGGACCCAGATGACATTCTGCGTGCAAATCGGTCGAGAGGGAAAACATACATGTTTGATGTGGCATTTGATTTCACAGCTACGCAGGAAGATGTTTATGTGGCAACCACAAAGAATTTAATTGAAGGTGTTATTTCGGGTTACAATGCCACTGTCTTTGCATATGGACCAACAGGTGCTGGAAAGACTTACACAATGCTGGGGCTGGATTCTGAGCCAGGGATCTATATTCGTACCTTGAATGACCTTTTCAAAGCAATTGAGGCAGGCAACGAAGATATGAACTGCACCGTCTACATGTCATATCTGGAGATATACAATGAGATGATTCGGGACCTTCTGAACCCTGCGTCTGGGTATCTGGACCTGCGAGAGGATGCCAAGGGAGAAATCCGTATTGCAGGCATCACTGAGTTCTCCACCAACAATGCAAAAGAGCGTACGCAGAAGATAATGCAGCTGCTTACAAAAGGGAACAAACAGCGGACCCAGGAGCCCACCGCCGCCAACAAAACGTCGTCGCGCTCTCACGCCATCCTACAAGTCACAGTCAAGCAGAAGAACAGAGTGAAGAACATCAACGAGGAGGTGCGAGTGGGGAAACTGTTCATGGTCGACCTGGCCGGGACAGAGAGGGCCTCCCAGACACAGAATCGTGGGAAGAGGATGAAGGAAGGAGCACATATTAACCGCTCCCTGCTTGCCTTGGCCAACTGTATCAATGCCCTGAGTGAGAAAGGTGGTAAAGGTGCCCAATTTGTCAATTACCGGGATAGCAAACTGACTCGACTGCTTAAGGATGCTCTTGGTGGAAACAGTAGAACCGTGATGATCACTCACATTAGTCCTGCCAGCACCAACTTTGAGGAGTCCAGAAACACACTGATCTATGCAGACAAGGCCAAAAACATAAGGACTAAGGTAAAGCGCAACCTGCTAAATGTCTCTTACCACATAGCCCAGTACACCAGCATCATTGCAGACCTTCGCCAAGAGATTGAGAGATTAAGAGCCAAGATAGATGAACAGGGTCAAGAAAACAGGAAAGGCGACAGGGCAGACATTCGTGATGTCCAAGCGGAGGTCCAGCAGCACTCTGCCCAGTACAGCCGCAGGGAGCTGGGCCGGCTGCGGGAACAGCTGCTCTCTGCTTTCCGGGAGCAGATGGAGATCCGTCGCAGCCTGGTGGAGCTGGAGAACTGTAACATGGAGCTGCATATCGACACCTCCAGACACCTGGTCACCATCTCAGACTGGGAAAGGGAGAGGGCCCGGTGTGCTAAGAAATGGAGGGATGAGAGGCACAGAGAGGAGGTGGATAAAGACGGAGAAGAGGAGCGGGAGCGGGACAGCGGGGGCGAGGACACGGACTCCACCGAGCCCCATGACGTCACCGCGGCTCGGGAGGAGATCGGCACGCTGCTGGCCGAGCAGAGGAAAACCATGGCGCTAAAGTCAGACCTGGAGGAGAAGCTCACAAGCATGAAGCTGAAGTCCTCCAAGATGGAGGAGCTGCTGCCGAAGCGGATTAGCAACGAGGAGCAGCGGGAGATCCTCACGCTCCTCTGCAGAGtgcacgagctggaggtggagaacACGGAGATCCAGTCCGTGGTGCTGTGCAAGGAGAACCTGATGCGCACGAAGGACTTCGTCATCCAGCGCTACGAGCATCGCAGGGCGCTGTGCGACGAGATAATACAGCGGCAGAGAGCCATCATTGAAGACCATCAGATCCCTGTTCCCCCTGAGCTGGATGAGCTCTATGCGTTGTATTACAGTGAACTGAATGATGGAAGCATCGACCAAGTTCTCAGTCTCCATACAATTACATCCAGCACAATGAGGGATGGATCAATATTAAATGTAGCAAGGCAGCTGAACCTTGGTGATTTGATTCCTGACACGGATAAAGGAGAGCTCAGCCCAAGGGTAGCTGTGCAAGAGAGTAGGACAACTCTAAATAAGTTTCCACCTACTTCAGTAGGTGATCATGAAAGTGAAAGTAATAAGGTTTTCAAATCCACTTCAAAATCCCATCAGATGAAACACGGCCACAATTCATCCAGCCCACCTCCATTAAATCAGCGCCCCAACGGGAAGGACAGCGCTCGCCAGTCTGAACAGGTCAGCCCAGAGACCATGAAGGAGATTGTGTTGGATACGAAGAGCATCTCCGTGATCGCGGCCAAGCGGCGATCGCACATTCAGGCCATGGAGCCGGCCAGTAGGCTGTCCATGGCCAAAGAGAGGAGCCTGATGTCAGTGCAGTCTCtggaggaaggggaggaggcCTCAGAGTCCCAGCGCCCGGTTAGCATCGACAACCTGGACCTCTCCACCCCCGATGAGCTGGAGGCCAGGAAGGCTCCACCCCGGGCTCCAGGGAGCTCGCAGTCCACCTCCAAGAAGGACCTGCCGAAAGCCAGCAGGAGGAACAACTCCATCGAGAGGCGCGCGCGAAAGAAGCGGTCCAAGTCTTTTGAGGTCAACTCAAAGAGGACATTCAAGATCAGTGCCTCCAGAAATCCAGGTCTTGAAAGTATTTCAGACAACagactacattcacaaaatgcAAACCAAATCTTGCACAAGAATGTGGGAAATCCTTCAACACCACCAGCAACCAAGGTTAAATATCCCATCTCTCATCACACAGGGGAAAGCCAAATCCAGAAGCTGGAGATGCATGGTACTCCACCCAGCACCATTCACCAGAAGAATGCAGAGGGAAGAGGTCAGACCATCTACAAACGAGTCAGAGGCCCTTCAGATATCTTGAGCAAAAATCAGTTGCTTCTACAGCCTGGGAATTTTAAACGAACAGCCAATGCCAATGCAAGACATAAGGGAACAGCTGAAAGCAACATCAAAACAAAAGCTCATACATCCGTCCGCTCTACCATTGCTGCCGACACCTCTAACAGTCAAGATAGCGGGGAACCTGGAAACGGAGGGCCTGCACACTGGAACAATGCTCTCCTCATGTGGAGATGGTGTCAGTCCACCTCCAAGCACAAAGCATATGACGACAAGGGTAACTCCTTCCTGTCGGACATTGATGCCTTCATTAACCAGTTCCTGGAGGGCACCGTTGAGCCCAGTCAGCAAGCGAAGGAGGATGTTGCCCCAGAAACATTGCACAACCAGTCTGGGGAAGCGGGGAAGCGGGAAGAGAAGTACGTTCCGAGGCGGGAGTGGAAGGTCCACCTGACTCCCATCTCTGTAGAGATGAGGCAGAGGCAGGAAGACAGGAAGCAGCTGATCCACGACCTCTGCACAAACAGCACCCTTGACTTCCTGGGAAAGAACAGGACATTCGATGACATCCCCAACAAGGACCTGGACCACCTGATTGTGGATGACCGGCACGGAATCATTTACTGTTACGTGCCAAAGGTAGCCTGCACCAACTGGAAGCGCATCATGATCGTGCTGAGCGAGAGTCTCTTAGTCGACGGGGCTCCCTACCAGGACCCTCTGGACATTCCACAAGAGCACATCCACAACAGCAGCCTCCATTTTACCTTCAACAAGTTCTGGAAGCGATACGGAAAGTTCTCTCGACACCTGATGAAGATCAAGCTGAaaaaatacaccaaatttatgTTTGTGAGGGACCCTTTTGTCAGGCTGATTTCCGCATACAGGAACAAATTTGAGCAGGTGAATGAAGAGTTTTACAAAAGATTTGCCGTCATCATGCTGAGAAGGTACGGCAATTACTCCGACCCCCCTGCCTCAGTTGTTGATGCATTTGCGGCTGGGATTCGCCCTTCGTTCTCACACTTTGTCCAGTATTTATTAGACTCCCAGACTGAAAAAGAGATGCCCTTCAACGAACACTGGCGCCAGGTGTATCGCCTGTGTCATCCCTGCCAAATCAATTATGACTTTATTGGGAAGTTGGAGACCTTGGACGAGGACGCAGAACACTTGCTCCGCATTCTTCGGGTGGATAATATTGTCCAGTTCCCTGCCAGCAACCGCAATAGAACAGTTAGCAGCTGGGAGCAGGATTGGTTTGCCAAAGTCCCCTATGAATTGAGACGAAAGCTCTACAAGCTTTATGAGGCTGACTTCAAACTTTTTGGATATTCCAAGCCTgaagaactgttacattag

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF03567	Sulfotransfer_2	Sulfotransferase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR005331	Family	Sulfotransferase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0008146	Molecular Function	sulfotransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-