Detailed information of SKAU_T00107450 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00107450MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERCM056378.1106754678106787147+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF17980ADD_DNMT3Cysteine rich ADD domain in DNMT3DomainInterproscan
PF21255ADDz_Dnmt3bDNMT3, ADD PHD zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000313DomainPWWP domainInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan
IPR025766DomainADD domainInterproscan
IPR027328FamilyMicrotubule-associated protein RP/EBInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR040552DomainDNMT3, cysteine rich ADD domain, GATA1-like zinc fingerInterproscan
IPR049554DomainDNMT3, ADD domain, PHD zinc fingerInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10623MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005815Cellular Componentmicrotubule organizing centerInterproscan
GO:0005881Cellular Componentcytoplasmic microtubuleInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0031110Biological Processregulation of microtubule polymerization or depolymerizationInterproscan
GO:0035371Cellular Componentmicrotubule plus-endInterproscan
GO:0035372Biological Processprotein localization to microtubuleInterproscan
GO:0051010Molecular Functionmicrotubule plus-end bindingInterproscan
GO:0051225Biological Processspindle assemblyInterproscan
GO:0051233Cellular Componentspindle midzoneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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