Detailed information of SKAU_T00053500 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00053500THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDCM056377.13426672534281860+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11635Med16_NMediator complex subunit 16, N-terminalRepeatInterproscan
PF20718Med16_bridgeMediator complex subunit 16, central helical bridgeDomainInterproscan
PF20719Med16_CMediator complex subunit 16, C-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011041Homologous_superfamilySoluble quinoprotein glucose/sorbosone dehydrogenaseInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR021665DomainMediator complex, subunit Med16, N-terminalInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR048338FamilyMediator complex, subunit Med16Interproscan
IPR048339DomainMediator complex subunit 16, C-terminalInterproscan
IPR048616DomainMediator of RNA polymerase II transcription subunit 16 , central helical bridgeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13224THYROID HORMONE RECEPTOR-ASSOCIATED PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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