Gene detail

Detailed information of SKAU_T00042120 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00042120	OS01G0253100 PROTEIN	CM056377.1	5289762	5304225	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00042120

ATGCTGTTGAGACCTGTCGACAGCATAACAGTATTTCATGAGTTAAAGGGGCTATGACTAAAAGAGGGTGGGACTTGGGCATTTCCTCATTATCGCAATAGCTAGATAAACTGGCGAGCGAGTTGCACACTATTCTACTGTCATAACGGCAATATTATGATCTCAATGGCGTCACATACAGATTCCTCCATGTTCTTATTTAATGTCCCACCATCGCGAATGGAGATGGTTTGTAAGATAATCGACAGTGGTGACGGAAGCCTCGGGTGGAGAGATTTGGCCGCGCGTATTTTGCCCAGTTGGTCAGAACTGCGGCTGACGGAGAGGCTGGAGGCTGCGGGAAAAAGCCCGACCAGCGAACTGCTCTGGTCCTGGGCCCAAAAGAACAAAACTGTGGGAGACTTACTCCGCGTTCTGGAGGACATGGGCCACGAAAGAGCGCTTCATGTGTTCAGGCCAGGAGACATGAAGCCCATGCCAAAAGAATGGCTTCCATGTAGTGAAGACTCTTCCCAGGAGTCATGTGACAGTGAGCAGTTCCATTATTCTCTCTGCACCACCAGCCAAGCTCAAAGATCGGGGAAAGCTGCTTTTTCAGAGCTGTATAAAGGCACGAAGGGAAGCCTGACCTTCGCTGTTAAACTGTTTAAACAGGAAAAGAACGCCTCTTGGAAGAAAGTGTGGAACGCGTTCAGAACAGAAATGGAAGTTCTTCACCATAAACAGCATCCAAACATCCTGGAGTTGTGGGGCTGCTTTTTGGAAGGGGAGAGATACTGCCTGGTTACCCCTTACCTTCCCAATGGGTCCCTATCTCATCAGCTGCATGATCAGGACCGGCTGAATATCATTAAAGGCACGGCGAGGGCAGTGGCTTACCTGCACACAGCCCCGCCCTGTGGGGTCATCTGTGGGAACATAACCAGTGAGAACATCCTGCTGGACGAGAGTGCATTGGACGTGTTCAGCCTTGGAGTGGTGATGATGGAGACGCTGACTGGACAGAAGCCAGTGCTGCAGAATCCCAAACGCCCCCTACTGagagacaTGTTATTTAGGGAAGTAGAGGAGAGTGGAGGGGTggatgtctgtctgtctcacctGGATGTGAGCGCTGGCTGCTGGCCTCATGCCACAGCGCTGTGCCTCTTCCACCTGGCCATGGATTGCACCGCCAGCCGTCACAAAACCCGGCCCAGCATGCACAGGgtccTGGAGGAGCTGAGCCAGCTGCTGCCGCTGCCCGGTCCCGCCCACAGACCATCTCCCTCAAACCCTGCAGGACTGCCAGGCCCCTGTGAGTGCAGCCAATCAGAGGTCACCTTCCTGAGTGATGTCAGCAGAGGGGCGGAGCACAGCTGGCCCTCCGACCTGTACAGCAGCTGGCCCGTGCAGTGCAGCTGCGCAGCTGAGGACGGACAGGAGTGTGAGGACTGCATCTCTAACGGATTCACACCTGCGCAATCTCACATCCCCACAGAAGCAGCACACGGGTCGCTGAAACAATGCGATATTGTGCAGAATTTGGCCAAGGAGAGATTCATAGACAAAATTCAGCTGTACAACAAAGGCTTGATCAACACAGAGGAACTCCTCTCCATGAAGATAGACTGACCTGGAGCAGAACAGCACCCTAGCAAGCGAGCTAGCAAGCGCTACATCCGTCTGCTAGCAAGCGCTACATCCGTCTGCTAGCAAGCGCTACATCCATCTGCTAGCAGCAGGACCGTTCACCAGCTATTCCAAATTCTCACCTCCGCCACCTGCTAGCTTACCGCTACAGTGCTGACCGAGCAGTAGCTGCCACTGGCAGTGGGCCACTAGGGGGCGGTGATGTATGCCTGCTCTCTGGGAGAGCACTGGACTCCAGGCCTCCGGGACACAGCTGCTGTTCACCTGGACAGAGGTACCTCACCTGACCTCACCTGACCTCACCTGCCTCAGGAAGCACTCATAAAAAAGAGCCGTTAAAAGCAGCCGTCTGCGCGCTGATGGGAGAGAGAGGCTTCCGGAACATCCACTGTAGGCGAGGTCATCGCGTGCTGTCAGTCACAGACTCTTAGGAACCAGCACAGACTCCCTGTAGGATATACAAGCTATAATAACCAGAGAACCCCCTCTACCATTACGATTGGAACAGTGTGCTCTAAATGCAATGTTAAATGACGTAAGAGATGATGTGTAAAACAATAAACTGTAAGAAATTCTTTTGATAAAAAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR042747	Domain	IRAK3, death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR27001	OS01G0253100 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-