Detailed information of SKAU_T00038760 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00038760INTERFERON REGULATORY FACTORCM056376.1139873598139895414-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyIRF

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00605IRFInterferon regulatory factor transcription factorDomainInterproscan
PF00656Peptidase_C14Caspase domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001309DomainPeptidase C14, p20 domainInterproscan
IPR001346DomainInterferon regulatory factor, DNA-binding domainInterproscan
IPR002138DomainPeptidase C14, caspase non-catalytic subunit p10Interproscan
IPR011600DomainPeptidase C14, caspase domainInterproscan
IPR015917DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR016129Active_sitePeptidase family C14A, His active siteInterproscan
IPR019817Conserved_siteInterferon regulatory factor, conserved siteInterproscan
IPR029030Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR033139Active_sitePeptidase family C14A, cysteine active siteInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11949INTERFERON REGULATORY FACTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0002376Biological Processimmune system processInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0004197Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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