| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00034210 | GH10160P | CM056376.1 | 124368890 | 124455806 | - |
| CDS | |||||
| SKAU_T00034210 | |||||
| Transcript |
| SKAU_T00034210 |
| Protein |
| SKAU_T00034210 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02931 | Neur_chan_LBD | Neurotransmitter-gated ion-channel ligand binding domain | Family | Interproscan |
| PF02932 | Neur_chan_memb | Neurotransmitter-gated ion-channel transmembrane region | Family | Interproscan |
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR002394 | Family | Nicotinic acetylcholine receptor | Interproscan |
| IPR006029 | Domain | Neurotransmitter-gated ion-channel transmembrane domain | Interproscan |
| IPR006201 | Family | Neurotransmitter-gated ion-channel | Interproscan |
| IPR006202 | Domain | Neurotransmitter-gated ion-channel ligand-binding domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR018000 | Conserved_site | Neurotransmitter-gated ion-channel, conserved site | Interproscan |
| IPR036719 | Homologous_superfamily | Neurotransmitter-gated ion-channel transmembrane domain superfamily | Interproscan |
| IPR036734 | Homologous_superfamily | Neurotransmitter-gated ion-channel ligand-binding domain superfamily | Interproscan |
| IPR038050 | Homologous_superfamily | Neuronal acetylcholine receptor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46171 | GH10160P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004888 | Molecular Function | transmembrane signaling receptor activity | Interproscan |
| GO:0005216 | Molecular Function | monoatomic ion channel activity | Interproscan |
| GO:0005230 | Molecular Function | extracellular ligand-gated monoatomic ion channel activity | Interproscan |
| GO:0006811 | Biological Process | monoatomic ion transport | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0022848 | Molecular Function | acetylcholine-gated monoatomic cation-selective channel activity | Interproscan |
| GO:0034220 | Biological Process | monoatomic ion transmembrane transport | Interproscan |
| GO:0045211 | Cellular Component | postsynaptic membrane | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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