Gene detail

Detailed information of SKAU_T00010870 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00010870	ALDEHYDE DEHYDROGENASE-RELATED	CM056376.1	29956785	30012489	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00010870

ATGCTTCGCACCGTTCTTACCAGAACCTTCCCCCGGATTGCGAGTCCGGTGGCCTGTCAGTACTCCGCCGCTGCTATCCCTGCTCCGAATACCCAGCCAGACGTGCACTTCAACAAGCTGTTCATCAATAATGAGTGGCATGATGCAGTCAGCAAGAAGACCTTCCCAACCATCAATCCATCAACTGGAGAGGTCATCTGTCAGGTCGCAGAGGGAGACAAGGCGGATGTGGACAAGGCAGTGAAAGCTGCCAAAGATGCCTTCAGGCTGGGATCACCATGGCGACGCATGGATGCTTCTGACAGAGGGCTGCTCCTGAACCGATTGGCTGATCGCATAGAGAGGGATGCGGCCTATCTGGCTGAGTTGGAGACGTTGGACAATGGGAAACCGTACGCAGTGTCTTACTGTGCGGACCTGCCCTTGGTCGTGAAGTGCTTCAGGTATTATGCTGGATGGGCAGACAAGTGGGAGGGGAAAACCATTCCGATCGATGGCGACTTCTTCTGCTACACGCGACATGAGCCCATCGGCGTGTGCGGCCAGATCATCCCGTGGAACTTCCCCCTCGTGATGCAGGCGTGGAAGCTGGGTCCAGCTCTGGCCACAGGGAACACAGTGGTGATGAAGGTGGCTGAACAGACACCACTCACAGCTCTGTATGTGGCCAACCTCATCAAGGAGGTGGGATTCCCGGCCGGAGTGGTGAATATTATCCCTGGAATGGGGCCCTCCGCAGGAGCAGCCATCGCCTCCCACATGGACGTGGACAAGGTGGCCTTTACAGGGTCTACAGAGGTGGGTCGTCTGATCCAGCAGGCATCTGGCAGCAGCAACCTGAAAAAGGTAACGCTGGAACTGGGAGGAAAAAGCCCCAACATCGTCATGTCTGACGCCAACAtggaagaCGCGGTGGAGCAGTCGCACTTAGCGCTCTTCTTTAACCAGGGCCAGTGCTGCTGTGCTGGCTCACGCACATTCGTGCAGGAGAGCATCTATAATGAGTTTATAGAGCGCAGCGTGGAGCGCGCCAATAAGACGGTGGTGGGCGACCCCTTCAACCTCAACACCGAGCAGGGGCCCCAGGTGGATGAGGAGCAGTTCCAGAAGATTCTGGGCTACATCAGCTCAGGGAAGCGGGAGGGGGCCAAGCTGATGTGCGGGGGAGGGGTGGCAGCCGACCGCGGATATTTCATCCAGCCGACCATCTTCGGAGACGTCCAGGACAACATGACCATCGCCCGCGAGGAGATATTTGGGCCAGTGATGCAGATCCTGAAGTTTAAGAACATGGAGGAGGTGCTGGAGAGAGCCAATGACAGCCAGTATGGACTGGCAGCCGCCGTCTTCACCAAGGACATCGACAAGGCGCACTACATCTCCAACGGGCTGCGTGCTGGCACTGTGTGGATAAACTGCTATGACGTGTTTGCACCCCAGGCTCCCTTCGGTGGCTACAAAGCCTCTGGGAACGGCCGGGAGCTGGGCCAGTACGGACTGGACAACTACACTGAAGTCAAAACGGTGACAATTAAGACATCCCGCTCTGGGCCCCGGTCGCTCTCCATGGTCGTTACGGCAGAGCCGAGGCGAGTGGTAGGACCTCCATTTCGTGGTGCGCGGAGAGGTCCAGGGGATCGCTCTGACCGAAACACACGAGTAGACCGACTAGGCTACAGAGAGCAGCGTGCCTCCCCTCGCGTTTCAAATCGGAGAAGAAGTGCAAGGAGCCGGCGGGACGAAGTTACACTCTGTAGCACCATGTCGGAGGACAACAATGTGGACAAGTTCATTAAGGAGACGTCCATCCTGGAGGAGTACAACATCAACTGGACTCAGAAGTTGGGGGCGGGTATCAGCGGACCCGTAAGGGTGTGTGTAAATAAGTCCACACAGGAGCGCCTCGCACTAAAGATCCTCATCGATCGGCCCAAGGCTCGCAATGAGGTGAGGCTGCACATGATGTGCGCAGCGCATCCAAACATCGTCCAGATCATGGAGGTGTACGCCAACAGCGTGCAGTTCCCCCATGAATCCAGCCCCAGggCAAGGTTGTTGATCGTCATGGAGATGATGGAAGGCGGGGAGCTGTTCCATCGGATCAGTCAGCACCCGGCACTTCACAGAGAAGATGGCCAGCCAGGTCACCAAAACAGGTCATTTATCATCAACAATGCAGCGCCAGGTTGGGTGGATTCATTTCACATCAGCCTGGTCAGACTGAAGTGCCCCCTGATCAGCCAGGCGTTGGAGCACTGCCACACGCTGAACATCGCACACAGAGACCTGAAGCCTGAGAACCTGCTGTTCAAGGACAACTCCTTGGATGCACCGGTAAAGTTATGTGATTTTGGATTTGCCAAAATCGACCAAGGTGACCTGATGACTCCACAGTTCACCCCCTTACTATGTAGCACCTCAGgtaCTGGAGGCACAGAGGAGACACCAGAAGGAAAAGTCTGGAATAATACCTACCTCACCAACTCCATACACCTACAACAAGagcTGTGA

Transcript

SKAU_T00010870

GGGCGGTCCTCGGACTGCTTGACGCTTACCACTGTCAAGCAGTTGGGTCGTCTTGCCGTGTTGCTGTTGCTCAGGTCTGGACGTTTGTTGAGGAATCACGATGCTTCGCACCGTTCTTACCAGAACCTTCCCCCGGATTGCGAGTCCGGTGGCCTGTCAGTACTCCGCCGCTGCTATCCCTGCTCCGAATACCCAGCCAGACGTGCACTTCAACAAGCTGTTCATCAATAATGAGTGGCATGATGCAGTCAGCAAGAAGACCTTCCCAACCATCAATCCATCAACTGGAGAGGTCATCTGTCAGGTCGCAGAGGGAGACAAGGCGGATGTGGACAAGGCAGTGAAAGCTGCCAAAGATGCCTTCAGGCTGGGATCACCATGGCGACGCATGGATGCTTCTGACAGAGGGCTGCTCCTGAACCGATTGGCTGATCGCATAGAGAGGGATGCGGCCTATCTGGCTGAGTTGGAGACGTTGGACAATGGGAAACCGTACGCAGTGTCTTACTGTGCGGACCTGCCCTTGGTCGTGAAGTGCTTCAGGTATTATGCTGGATGGGCAGACAAGTGGGAGGGGAAAACCATTCCGATCGATGGCGACTTCTTCTGCTACACGCGACATGAGCCCATCGGCGTGTGCGGCCAGATCATCCCGTGGAACTTCCCCCTCGTGATGCAGGCGTGGAAGCTGGGTCCAGCTCTGGCCACAGGGAACACAGTGGTGATGAAGGTGGCTGAACAGACACCACTCACAGCTCTGTATGTGGCCAACCTCATCAAGGAGGTGGGATTCCCGGCCGGAGTGGTGAATATTATCCCTGGAATGGGGCCCTCCGCAGGAGCAGCCATCGCCTCCCACATGGACGTGGACAAGGTGGCCTTTACAGGGTCTACAGAGGTGGGTCGTCTGATCCAGCAGGCATCTGGCAGCAGCAACCTGAAAAAGGTAACGCTGGAACTGGGAGGAAAAAGCCCCAACATCGTCATGTCTGACGCCAACAtggaagaCGCGGTGGAGCAGTCGCACTTAGCGCTCTTCTTTAACCAGGGCCAGTGCTGCTGTGCTGGCTCACGCACATTCGTGCAGGAGAGCATCTATAATGAGTTTATAGAGCGCAGCGTGGAGCGCGCCAATAAGACGGTGGTGGGCGACCCCTTCAACCTCAACACCGAGCAGGGGCCCCAGGTGGATGAGGAGCAGTTCCAGAAGATTCTGGGCTACATCAGCTCAGGGAAGCGGGAGGGGGCCAAGCTGATGTGCGGGGGAGGGGTGGCAGCCGACCGCGGATATTTCATCCAGCCGACCATCTTCGGAGACGTCCAGGACAACATGACCATCGCCCGCGAGGAGATATTTGGGCCAGTGATGCAGATCCTGAAGTTTAAGAACATGGAGGAGGTGCTGGAGAGAGCCAATGACAGCCAGTATGGACTGGCAGCCGCCGTCTTCACCAAGGACATCGACAAGGCGCACTACATCTCCAACGGGCTGCGTGCTGGCACTGTGTGGATAAACTGCTATGACGTGTTTGCACCCCAGGCTCCCTTCGGTGGCTACAAAGCCTCTGGGAACGGCCGGGAGCTGGGCCAGTACGGACTGGACAACTACACTGAAGTCAAAACGGTGACAATTAAGACATCCCGCTCTGGGCCCCGGTCGCTCTCCATGGTCGTTACGGCAGAGCCGAGGCGAGTGGTAGGACCTCCATTTCGTGGTGCGCGGAGAGGTCCAGGGGATCGCTCTGACCGAAACACACGAGTAGACCGACTAGGCTACAGAGAGCAGCGTGCCTCCCCTCGCGTTTCAAATCGGAGAAGAAGTGCAAGGAGCCGGCGGGACGAAGTTACACTCTGTAGCACCATGTCGGAGGACAACAATGTGGACAAGTTCATTAAGGAGACGTCCATCCTGGAGGAGTACAACATCAACTGGACTCAGAAGTTGGGGGCGGGTATCAGCGGACCCGTAAGGGTGTGTGTAAATAAGTCCACACAGGAGCGCCTCGCACTAAAGATCCTCATCGATCGGCCCAAGGCTCGCAATGAGGTGAGGCTGCACATGATGTGCGCAGCGCATCCAAACATCGTCCAGATCATGGAGGTGTACGCCAACAGCGTGCAGTTCCCCCATGAATCCAGCCCCAGggCAAGGTTGTTGATCGTCATGGAGATGATGGAAGGCGGGGAGCTGTTCCATCGGATCAGTCAGCACCCGGCACTTCACAGAGAAGATGGCCAGCCAGGTCACCAAAACAGGTCATTTATCATCAACAATGCAGCGCCAGGTTGGGTGGATTCATTTCACATCAGCCTGGTCAGACTGAAGTGCCCCCTGATCAGCCAGGCGTTGGAGCACTGCCACACGCTGAACATCGCACACAGAGACCTGAAGCCTGAGAACCTGCTGTTCAAGGACAACTCCTTGGATGCACCGGTAAAGTTATGTGATTTTGGATTTGCCAAAATCGACCAAGGTGACCTGATGACTCCACAGTTCACCCCCTTACTATGTAGCACCTCAGgtaCTGGAGGCACAGAGGAGACACCAGAAGGAAAAGTCTGGAATAATACCTACCTCACCAACTCCATACACCTACAACAAGagcTGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016160	Conserved_site	Aldehyde dehydrogenase, cysteine active site	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan
IPR029510	Conserved_site	Aldehyde dehydrogenase, glutamic acid active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11699	ALDEHYDE DEHYDROGENASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004029	Molecular Function	aldehyde dehydrogenase (NAD+) activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-