Detailed information of SKAU_T00006650 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00006650MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSCM056376.11612929816166158+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF07569HiraTUP1-like enhancer of splitFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR011494DomainProtein HIRA-like, C-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR031120FamilyWD repeat HIR1-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13831MEMBER OF THE HIR1 FAMILY OF WD-REPEAT PROTEINSInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000417Cellular ComponentHIR complexInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan
GO:0006336Biological Processchromatin organizationInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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