Gene detail

Detailed information of SKAU_T00001370 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00001370	ALDEHYDE DEHYDROGENASE	CM056376.1	2523493	2532283	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00001370

cccgatatggatgcaaaaatccaatgttctggagtacagagggAAAACAACAAAGAATTTGTCACTGCTCGAATACTTTCGGTCCccaatgtatatgtgtgtattacaaaatattttccccacaaattgtagcctatagctaattaaTATGTTTTGCACCAAATAAATCGAATGCCATTTATGGGAAATGTACAGCGCTGCACATTTTCTAATACCAGTCACGGGAAACACGTGATTTAAGATAATGATTATGGAAAACTAATTGCGTGGAGTCGCACTTTTTTCCCTTACCCCTGGATAAAGATATTTCTGCGCAGACTCTAAAATATCACCCAGAACTTTTCCCATAGCCTGTCTTCTTCAGAGTTGCCGGTGGACACGCACCTTCTGTGAAGGTCAGGATTTTAGGAGCGTCTTTATGTTAATCAAGAAGCATGAGCGCACCACCAAGCCCTTCTCCAACACGATGGTTCAAGGCATTGAGAAGAACCCGGATAGGGGACTCCTGTACGAAGGCTGGCCCCGTGTCCTGCGCGGAGCAGCTGAAGAGGGCCAGGGCAGCTTTCCGAGCCGGACGCACGTTGAAGGAGTGTTTCCGACAGGCCCAGTTGGAGGCTCTGGTCCGCATGCTGGCCGAACACGAGTGTGACTTTGTGGACGCGCTCTGCAGGGACCTACATAAGCCCCGGTTTGAGACAGTGGTGTCCGAGCTGATCCTGGTGAAGAACGAGGCCCTGTACGCCATTAACAACCTCACTAAATGGATGGAGCCACAGCATGTGGAGAGGAACCTGGCTACCTCTCTGGATCAGTGCATGGTGGTTACTGAGCCCCTCGGGGTGGTGCTGGTGGTCGGGGCCTGGTGCAGCCCGGTCCAACTCTGCCTGGTGCCCCTGGTGGGGGCTATTGCTGCAGGTAACTGCGTGATCATCAATCCTTCAGATATCAGTTCTCACACAGCAGAGCTTCTACACAGACTTGTCCCATCCTACCTGGATAATGAGTGCTACCATGTGCTACTTGCATCAGCGAGTGACCTGCCTGAAATTGTAGATCTCAAGTTTGATCACGTATTCTTTACAGGCAACAGTGCTGATGGGACCAAGGTCGCTCAGACGGCTGCCCGCACGCTCACCCCCGTCAGCCTGGTTCTGGACGGGAAGAACCCCTGCTACGTGGACCAGCATTGCGACATCGGCACCGCGGCCCGACGCATCGCCTGGGCTCGCTTCCACAACGCGGGCCAGAGCGGCGTGGCGCCCGACTACGTGCTGTGCCACGCGGACGCCAAGGCCCAGCTGGTGCAGGCCCTGCGCTGCTCCCTGCTGGAGTTCTATGGCACCGACCCCCGCGAGTCCCGCAGCTTCGGCCGCATGGTGAACGCGGAGAACTTCACCCGCGTGCGGGACATGCTCGGGAAGTCTGGGACGGTGGCCGTCGGGGGACAGGTGAACGAGGCGGAGAAGTACATCGCCCCTACACTGCTGACAGAGGTGATGGAGGCAGATCCCATCATGCAGCAGGAGGTATTTGGGCCAGTCCTGCCCATCCTGACTGTAAACAACGTGGACGAAGCCATTTCCTTCATCTGCCGGCGCGAGAAGCCGCTCTGTGTGTACGTGTACTCCAGCAATAGCAAGGTCATCTCTCGGCTGATGGAGGAAACATCCAGCGGGAGCTTCTGTGCCAATGACAGCATTTTGCAGAGCCTGATGGTAGTGCTCCCCTTCGGAGGAGTGGGTGCCAGTGGGATGGGCTCCTACCACGGACGCTCCAGCTTCGACACCTTCTCCCACAGGAAGTCCTGCCTGCTGCGCGGCACGCGCATCGAGTGTGTGACCTACCTGCGTTACCCTCCCTATGAGGACCGAAACCTGTCGCTCATGACGTGGGCCAGCACCCTGTCCAACAAGAGCCAGGGCTGGTGCCAGATCCTGTAAGGGGTCGCCGACTACGCCCAGAGGCGGCCATCTTGCTTCCACAGTGCCAAGGATGTGGAAGGACCTCAGCCTGCAGGAAGGTCCTTGTAAAGGAGGTGAAAGCAGGTGAATACACACTTCCCTCTGGTGCAGTGCCCTGCTTCTGCTGAGACGTTCATCTTGGTCTGCCAGACTGTTCACTATGCATCAGACCTGgatcaaatatgtatttgaaatatttactCTGTAGAAGCTGGTAAAATTTTAAACCCGCTGCAGACCCGTGAATTTTCAATGAAACGTTACTAACCAGAACATACAATCAtgtgaaaaaaaaatacttttgttCTAAATAttgctgaaaataaattattccaTGGTCAGAAATCTGCAGGCATTTCTGGTGtatatggggttaaagtgcatcAAATAATAACTTGATCCTGGTTTGCTGCATGCATCTCTTGTGATTCCTCTGAAGTTCGTAGTCCCCAAATAAAGAGCTCTTTTCCCATGTTGTTGTAGCGCTTGAAATGTGGCAATCTCAGTCCTTTTGTATGAGGAAATATACCCTAGTAATTCTGTACTGATTCTTACACCATGTTTGTCTTAAGCCTCCCACTTGTGAAGAATATAGGATTGAGAAATGTGATTTTTAAGGTTGTTTGCTGCCTTTCATTCAGTCTTTATTGTAATATTGTTCCAAATGCCTCTTGTATAATGAGGTGATGTCCACAGGAAACATTGCAATGATCTGAATGTGGATTGGAATTTCAGCAAAGAGGCTGTAATCAAATGAATTGTAACAATGCCAAAACAATAACACGGTCTTAATgttacagtacaaaaaaaaaaaaaataggtatAAAAATACAAGCCTTGCAAGTACATGCAAATATGCATAACAGTAGATGCATATGTAAAACTATTGTCCTGTCTTGTACATAACGATGAAACACTGAAACTAGCTTCTAAAAATATATGTCTGTTGTGTGTTTGGCTGGATGGGAAATATTTTGTTCTTCAGAGTAGACAAATGTGAATGTGCCCCAGTTTATATGAACATAAGTGTGAAAAGTTTATTTTGCATGAACACAATCG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00171	Aldedh	Aldehyde dehydrogenase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012394	Family	Aldehyde dehydrogenase NAD(P)-dependent	Interproscan
IPR015590	Domain	Aldehyde dehydrogenase domain	Interproscan
IPR016161	Homologous_superfamily	Aldehyde/histidinol dehydrogenase	Interproscan
IPR016162	Homologous_superfamily	Aldehyde dehydrogenase, N-terminal	Interproscan
IPR016163	Homologous_superfamily	Aldehyde dehydrogenase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43570	ALDEHYDE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004028	Molecular Function	3-chloroallyl aldehyde dehydrogenase activity	Interproscan
GO:0004029	Molecular Function	aldehyde dehydrogenase (NAD+) activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006081	Biological Process	aldehyde metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016620	Molecular Function	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-