Gene detail

Detailed information of SKAU_T00000440 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00000440	N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER	CM056376.1	803043	862515	-

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00000440

ATGACCCCAATGAAGAAGGCCAGGTCCCTGATTGGCGATGCAGGTGTTTATTTCTCCAATGCATTTACAGTGACGCCGCTCTGCTGCCCCAGTCGGAGCAGCATCCTGACGGGCAAGTACTCCCACAACCACCAGGTCCACAACAACTCCCTGACGGGCAACTGCAGCAGTCCGGCCTGGCAGAAGGGTCCGGAGACCCTCGCCTTTCCCGTCTACCTCAACAAGCAGCTCTACCAGACCTTCTATGGGGGGAAATACCTCAACCAGtaCGGAAAGAAAGGAGCAGGAGAGGTGAGCCACATCCCTCCAGGCTGGGACCATTGGCATGCTCTGGTGGGGAGCTCCAagtactacaactacagcctgtCGGTGAATGGGAAGGAAGAGCTACATGGAGACAGCTATGAAAAGGACTACCTGACAGACCTCATTGCAAACAGGTCCCTGGAGTTTCTGGATAAACTGAGCCCCCAGCACCCCTTTTTTATGATGCTGGCTCCCCCTGCATCCCATTCACCGTGGACGGCAGCACCTCAGTACCAGGGCGCCTTCAATGGCACCAAAGCACCGCGTGATGGCAGCTTTAACAAGCCAGGAAAGGATAAACACTGGCTTCTTCGGCAGGCCGTCAACCCCATGTCTGACACTTCGATCACGTTTCTGGACAATGCGTTTCGCAAGAGGTGGCAGACTCTGCTGTCTGTCGATGACATGGTGGAGAAAGTGGTGAAGAAGCTGGAGGGCCTGCAGCTTCTGAACAACACTTACATTTTCTACACCTCTGACCATGGCTACCACTCTGGCCAGTTCTCTCTGCCCATTGACAAGCGGCAGCTGTATGAGTTTGACATTCGGGTCCCTCTGATGGTGCGAGGACCTGGAATTAAACCCAACCAGAccctgcagGCTCCTGTACTGAACATCGACCTGGCCCCCACCTTCCTGGATATCGCTGGACTCAATCTGTCCATGGTGAATGTGGATGGACAGTCCTTCCTATCCCAGATGGCTCCTTCTCTGCGCAATGGCTCCACTCGTTCCTATTTTCTGGTGCAGCACGTCGGGGAGTATGACTCTAAAGCGGACCCTGCCTGTCCCAAACTGGGCCCGGGCCTGTCTCACTGCTTCCCAGACTGTGTTTGTGAGGATGCCTGTAATAACACATATGCCTGCGTTCGCACTCTCAAAGACACCAACTTACAGTACTGTGAGTTTGCAGACAGAGAGCAGATCCTGGAGGCGGTGCTTCACTGCCATCAAATGGGCGTGGTGCACCGAGATCTGAAGCAAAGTATTCTTTTCTTGGTATATGGAAAGACAAACAGCTTTGTATTATGGccaGAGAACCTGCTACTGGCCAGTAAGTGTAAGAATGCTGCCGTTAAGCTGGCCGATTTTGGGCTGGCCATCGAGGTGCAGGGGGAACAGCAGGCCTGGTTCGgGTTTGCGGGGACGCCAGGGTACCTGTCCCCTGAAGTGCTGCGGAAGGAGGCCTATGGCAAGCCCGTGGACATCTGGGCCTGCGGTGTCATCCTCTACATCCTGCTGGTGGGGTACCCACCCTTCTGGGACGAGGACCAGCACAAACTGTACCAGCAGATCAAAGCAGGAGCCTACGATTTCCCCTCTCCTGAGTGGGACACTGTCACCCCTGAAGCCAAGAACCTGATCAATCAGATGCTGACCATCAACCCAGCAAAGAGGATTACCGCCCAGGAAGCGCTCAAACACCCATGGGTCTGCcaacGCTCTACTGTAGCCTCTATGATGCACAGACAGGAGACAGTGGAGTGCCTGAAGAAATTCAACGCCAGGAGGAAACTGAAGGGGGCCATTCTCACCACCATGCTGGTGTCTCGGAACTTCTCTGCAGCCAAGAGTTTGCTGAACAAGAAAGCAGATGTGAAGCCACAGTCAAACAGCACGAAAAACAGCATAGTGACCAGTCCCAAAGGAAGCGTCCCTTCTGCTCTGGAGTCCTCTGACAGTAGCAACACCACCATTGAGGATGAGGATGTGAGAGCACGCAAACAGGAAATCATCAAAATCACAGAGCAGTTGATTGAGGCCATCAACAATGGAGACTTTGAAGCCTACGCGAAGATCTGTGACCCCGGGCTGACCTCCTTTGAGCCTGAGGCATTGGGTAACCTGGTAGAGGGGATGGACTTCCACAAATTCTACTTTGAGAACCTGCTGTCCAAGAACAACAAGCCCATCCACACCACCATCCTGAACCCCCACGTGCACCTGATCGGGGAGGACGCCGCCTGCATCGCCTACATCCGCCTCACGCAAACGTCCACTTCCACTGCTCGGGTGCTCCTGCCGCGCCACTCCAGTGAGGGGGACACTGCCGTGGACACTTTGGACAAGAGTGCCCAGCTGAAGAGAGGGACGGAGGGGAGAAGTCCAGGGTTGGATAGCTTTGAGCCAGCAGCGCCCGGCCGGCCCTCCTGCACTGGGCACCCTTCCTCACCCGCATGCTCATCTCTACACAACTACCGCCACCTGCTGGGCTGCCCTTGCTACTGCAACCAACATCAATATCAAAAAGCACACCCTACAACCAACCCAATCCACTGTCCTACCAACTCCACTACCCCCCTACCCACACAGATACCCCTACCCCACATCCCCGGGCCTCGCACCCCCAGCCAGGCGCTCGGAGGGCCTGCGAGTCAGTGTGCGTACAGCCGTTTCCCTGGGTGGAGTGGAGAGGGagatcacggcagggcagggATCCAATCGCTAGGCTCCTGGCAGTATGGATGGCTCTCTGGACCATGTGGAGGAAAGACGGGCCTGGAGGTCTTTGTGCTTCAGTGTAGGAGTTTCCGCAAAGAGATCTGA

Transcript

SKAU_T00000440

aagggttgagaaccactggtctagaggGCTTCAGTTCCTTATTATAAAATTCCTCTAAACCCCTTCCCCAATTATTTTCACAATATACTTTTTTCACTGTGAACCTGATGACCGCAAACAGGATTCAGTTATAATGAGCTATGACCCCAATGAAGAAGGCCAGGTCCCTGATTGGCGATGCAGGTGTTTATTTCTCCAATGCATTTACAGTGACGCCGCTCTGCTGCCCCAGTCGGAGCAGCATCCTGACGGGCAAGTACTCCCACAACCACCAGGTCCACAACAACTCCCTGACGGGCAACTGCAGCAGTCCGGCCTGGCAGAAGGGTCCGGAGACCCTCGCCTTTCCCGTCTACCTCAACAAGCAGCTCTACCAGACCTTCTATGGGGGGAAATACCTCAACCAGtaCGGAAAGAAAGGAGCAGGAGAGGTGAGCCACATCCCTCCAGGCTGGGACCATTGGCATGCTCTGGTGGGGAGCTCCAagtactacaactacagcctgtCGGTGAATGGGAAGGAAGAGCTACATGGAGACAGCTATGAAAAGGACTACCTGACAGACCTCATTGCAAACAGGTCCCTGGAGTTTCTGGATAAACTGAGCCCCCAGCACCCCTTTTTTATGATGCTGGCTCCCCCTGCATCCCATTCACCGTGGACGGCAGCACCTCAGTACCAGGGCGCCTTCAATGGCACCAAAGCACCGCGTGATGGCAGCTTTAACAAGCCAGGAAAGGATAAACACTGGCTTCTTCGGCAGGCCGTCAACCCCATGTCTGACACTTCGATCACGTTTCTGGACAATGCGTTTCGCAAGAGGTGGCAGACTCTGCTGTCTGTCGATGACATGGTGGAGAAAGTGGTGAAGAAGCTGGAGGGCCTGCAGCTTCTGAACAACACTTACATTTTCTACACCTCTGACCATGGCTACCACTCTGGCCAGTTCTCTCTGCCCATTGACAAGCGGCAGCTGTATGAGTTTGACATTCGGGTCCCTCTGATGGTGCGAGGACCTGGAATTAAACCCAACCAGAccctgcagGCTCCTGTACTGAACATCGACCTGGCCCCCACCTTCCTGGATATCGCTGGACTCAATCTGTCCATGGTGAATGTGGATGGACAGTCCTTCCTATCCCAGATGGCTCCTTCTCTGCGCAATGGCTCCACTCGTTCCTATTTTCTGGTGCAGCACGTCGGGGAGTATGACTCTAAAGCGGACCCTGCCTGTCCCAAACTGGGCCCGGGCCTGTCTCACTGCTTCCCAGACTGTGTTTGTGAGGATGCCTGTAATAACACATATGCCTGCGTTCGCACTCTCAAAGACACCAACTTACAGTACTGTGAGTTTGCAGACAGAGAGCAGATCCTGGAGGCGGTGCTTCACTGCCATCAAATGGGCGTGGTGCACCGAGATCTGAAGCAAAGTATTCTTTTCTTGGTATATGGAAAGACAAACAGCTTTGTATTATGGccaGAGAACCTGCTACTGGCCAGTAAGTGTAAGAATGCTGCCGTTAAGCTGGCCGATTTTGGGCTGGCCATCGAGGTGCAGGGGGAACAGCAGGCCTGGTTCGgGTTTGCGGGGACGCCAGGGTACCTGTCCCCTGAAGTGCTGCGGAAGGAGGCCTATGGCAAGCCCGTGGACATCTGGGCCTGCGGTGTCATCCTCTACATCCTGCTGGTGGGGTACCCACCCTTCTGGGACGAGGACCAGCACAAACTGTACCAGCAGATCAAAGCAGGAGCCTACGATTTCCCCTCTCCTGAGTGGGACACTGTCACCCCTGAAGCCAAGAACCTGATCAATCAGATGCTGACCATCAACCCAGCAAAGAGGATTACCGCCCAGGAAGCGCTCAAACACCCATGGGTCTGCcaacGCTCTACTGTAGCCTCTATGATGCACAGACAGGAGACAGTGGAGTGCCTGAAGAAATTCAACGCCAGGAGGAAACTGAAGGGGGCCATTCTCACCACCATGCTGGTGTCTCGGAACTTCTCTGCAGCCAAGAGTTTGCTGAACAAGAAAGCAGATGTGAAGCCACAGTCAAACAGCACGAAAAACAGCATAGTGACCAGTCCCAAAGGAAGCGTCCCTTCTGCTCTGGAGTCCTCTGACAGTAGCAACACCACCATTGAGGATGAGGATGTGAGAGCACGCAAACAGGAAATCATCAAAATCACAGAGCAGTTGATTGAGGCCATCAACAATGGAGACTTTGAAGCCTACGCGAAGATCTGTGACCCCGGGCTGACCTCCTTTGAGCCTGAGGCATTGGGTAACCTGGTAGAGGGGATGGACTTCCACAAATTCTACTTTGAGAACCTGCTGTCCAAGAACAACAAGCCCATCCACACCACCATCCTGAACCCCCACGTGCACCTGATCGGGGAGGACGCCGCCTGCATCGCCTACATCCGCCTCACGCAAACGTCCACTTCCACTGCTCGGGTGCTCCTGCCGCGCCACTCCAGTGAGGGGGACACTGCCGTGGACACTTTGGACAAGAGTGCCCAGCTGAAGAGAGGGACGGAGGGGAGAAGTCCAGGGTTGGATAGCTTTGAGCCAGCAGCGCCCGGCCGGCCCTCCTGCACTGGGCACCCTTCCTCACCCGCATGCTCATCTCTACACAACTACCGCCACCTGCTGGGCTGCCCTTGCTACTGCAACCAACATCAATATCAAAAAGCACACCCTACAACCAACCCAATCCACTGTCCTACCAACTCCACTACCCCCCTACCCACACAGATACCCCTACCCCACATCCCCGGGCCTCGCACCCCCAGCCAGGCGCTCGGAGGGCCTGCGAGTCAGTGTGCGTACAGCCGTTTCCCTGGGTGGAGTGGAGAGGGagatcacggcagggcagggATCCAATCGCTAGGCTCCTGGCAGTATGGATGGCTCTCTGGACCATGTGGAGGAAAGACGGGCCTGGAGGTCTTTGTGCTTCAGTGTAGGAGTTTCCGCAAAGAGATCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00884	Sulfatase	Sulfatase	Family	Interproscan
PF08332	CaMKII_AD	Calcium/calmodulin dependent protein kinase II association domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000917	Domain	Sulfatase, N-terminal	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013543	Domain	Calcium/calmodulin-dependent protein kinase II, association-domain	Interproscan
IPR017850	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR024607	Conserved_site	Sulfatase, conserved site	Interproscan
IPR032710	Homologous_superfamily	NTF2-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43108	N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004683	Molecular Function	calcium/calmodulin-dependent protein kinase activity	Interproscan
GO:0005516	Molecular Function	calmodulin binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005539	Molecular Function	glycosaminoglycan binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0008449	Molecular Function	N-acetylglucosamine-6-sulfatase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-