Detailed information of PMEG.utg000363l.7 in Placopecten magellanicus Gene info
Gene IDAnnotationChromosomeStartEndStrand
PMEG.utg000363l.7ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAchrom01100006102100072975-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00633HHHHelix-hairpin-helix motifMotifInterproscan
PF00730HhH-GPDHhH-GPD superfamily base excision DNA repair proteinDomainInterproscan
PF12698ABC2_membrane_3ABC-2 family transporter proteinFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000445Conserved_siteHelix-hairpin-helix motifInterproscan
IPR003265DomainHhH-GPD domainInterproscan
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004035Binding_siteEndonuclease III, iron-sulphur binding siteInterproscan
IPR004036Conserved_siteEndonuclease III-like, conserved site-2Interproscan
IPR011257Homologous_superfamilyDNA glycosylaseInterproscan
IPR013525DomainABC-2 type transporter, transmembrane domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR023170Homologous_superfamilyHelix-hairpin-helix, base-excision DNA repair, C-terminalInterproscan
IPR026082FamilyABC transporter AInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030841FamilyEndonuclease III-like protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006285Biological Processbase-excision repair, AP site formationInterproscan
GO:0006869Biological Processlipid transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0019104Molecular FunctionDNA N-glycosylase activityInterproscan
GO:0042626Molecular FunctionATPase-coupled transmembrane transporter activityInterproscan
GO:0043231Cellular Componentintracellular membrane-bounded organelleInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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