Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PMEG.utg000363l.7 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | chrom01 | 100006102 | 100072975 | - |
CDS | |||||
PMEG.utg000363l.7 | |||||
Transcript |
PMEG.utg000363l.7 |
Protein |
PMEG.utg000363l.7 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00005 | ABC_tran | ABC transporter | Domain | Interproscan |
PF00633 | HHH | Helix-hairpin-helix motif | Motif | Interproscan |
PF00730 | HhH-GPD | HhH-GPD superfamily base excision DNA repair protein | Domain | Interproscan |
PF12698 | ABC2_membrane_3 | ABC-2 family transporter protein | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000445 | Conserved_site | Helix-hairpin-helix motif | Interproscan |
IPR003265 | Domain | HhH-GPD domain | Interproscan |
IPR003439 | Domain | ABC transporter-like, ATP-binding domain | Interproscan |
IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
IPR004035 | Binding_site | Endonuclease III, iron-sulphur binding site | Interproscan |
IPR004036 | Conserved_site | Endonuclease III-like, conserved site-2 | Interproscan |
IPR011257 | Homologous_superfamily | DNA glycosylase | Interproscan |
IPR013525 | Domain | ABC-2 type transporter, transmembrane domain | Interproscan |
IPR017871 | Conserved_site | ABC transporter-like, conserved site | Interproscan |
IPR023170 | Homologous_superfamily | Helix-hairpin-helix, base-excision DNA repair, C-terminal | Interproscan |
IPR026082 | Family | ABC transporter A | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR030841 | Family | Endonuclease III-like protein 1 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR19229 | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003677 | Molecular Function | DNA binding | Interproscan |
GO:0003824 | Molecular Function | catalytic activity | Interproscan |
GO:0003906 | Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | Interproscan |
GO:0005319 | Molecular Function | lipid transporter activity | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006281 | Biological Process | DNA repair | Interproscan |
GO:0006284 | Biological Process | base-excision repair | Interproscan |
GO:0006285 | Biological Process | base-excision repair, AP site formation | Interproscan |
GO:0006869 | Biological Process | lipid transport | Interproscan |
GO:0016020 | Cellular Component | membrane | Interproscan |
GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
GO:0019104 | Molecular Function | DNA N-glycosylase activity | Interproscan |
GO:0042626 | Molecular Function | ATPase-coupled transmembrane transporter activity | Interproscan |
GO:0043231 | Cellular Component | intracellular membrane-bounded organelle | Interproscan |
GO:0055085 | Biological Process | transmembrane transport | Interproscan |
GO:0140359 | Molecular Function | ABC-type transporter activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |