Detailed information of PE_Scaf9834_2.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9834_2.8TETRATRICOPEPTIDE REPEAT PROTEIN 31Superscaffold43531076935360945+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF00226DnaJDnaJ domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47678TETRATRICOPEPTIDE REPEAT PROTEIN 31Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9834_2.8 global RNA-seq network
TOP