Detailed information of PE_Scaf9619_2.8 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf9619_2.8INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGSuperscaffold1251819165211394-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00515TPR_1Tetratricopeptide repeatRepeatInterproscan
PF13174TPR_6Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44117INTRAFLAGELLAR TRANSPORT PROTEIN 88 HOMOLOGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0019894Molecular Functionkinesin bindingInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0042073Biological Processintraciliary transportInterproscan
GO:0097546Cellular Componentciliary baseInterproscan
GO:0097730Cellular Componentnon-motile ciliumInterproscan
GO:1905515Biological Processnon-motile cilium assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf9619_2.8 global RNA-seq network
TOP