Gene detail

Detailed information of PE_Scaf9046_6.2 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf9046_6.2	-	Superscaffold5	46220663	46222856	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf9046_6.2

ATGTTGCCGGTTGCGAAGAGTTCTAGCCGCCACGACGCCGCCGGTGAGCTAAGCACCAAGGCGCGGCCGGCGGCCGGCGGCCGGCGGCCGGTTCGTACGACGGCTAACCAACTCTGCATGTAGACAAAACAGGAATCTTAGAAAGCGAATCGTTCCTCATATTTACCGACATGTTGCAAGAGGCGGTGGACTAACCCGGTGTTCTCTCTCATCTTTAAGGGCGCGAGCCGGGAGGAGGAGACAGACGCGGACAACAGATACGGGTCTTCTTCCTCGCCGGCCCCGAGAGAGAGAGAGAGACGCCGGGAGAGCGTTAAGCGGAGGATCACCAACAGACGGTGCAGATGAGAGGACGTCAGCACGTGAACGAGAGAATTAGATGTGCACTTCTACGACCAACTGAGCAGCTAAGATCGGCGACGGCAATACCGTCATTCCATCTGCTCTAGCGACGGAAGCGAGCGCCTCCAGCCGGGTACGACACCGGCAGCTGATGAAGTGAACTCCACCCGTTGTATAGGTCTCGTTATTCGTTCGTCACCACCGACCCGCCACCATGATTATCCCCGTCATCAACGTCGACCTGTCCCAGGTGTTCCAGTCCATACAAGACAAGATCAACACGCCCGAGTCGCAGCGTCGTCTCGTGCTCGTCATCGTGTGTATAGCTCTGCTGCTCGACAACATGCTCTACATGGTCATAGTGCCTATCATCCCCGTGTATCTGAAGGACATGAGAGACACGTCCCAGGTGCAAAGTGTCAACCCGCAGGCGGCCTCTGATGTCACCAACTGGACACACTACGACAACCACACGAAGAAACACCTGTTCCCGCTCGTCGAGTTCGACCCATCCTACCAGGACGCCAGTATCGGCTTCCTGTTCGCCTCGAAGGCGATTGTTCAGCTGCTGGTCAACCCGCTGTCCGGTACAGTAATTGACCGCATCGGCTACGACCAGCCGATGTTGCTAGGCCTGAGTATCATATTCGTGTCGACCGCCATCTTCGCCTTCGGTAAGAGCTACGCCGTTCTGTTCTTCGCGCGCAGCCTCCAGGGGGCAGGGTCGGCGTTCGCGGACACTTCCGGTCTGGCGATGATCGCTGACCGTTACACGGAGGAGAAGGCCCGCAGCAAGGCGCTCGGCATCGCCCTCGCATTCATCTCGTTCGGTTGTCTGTTCGCACCGCCGTTCGGTGGCATCCTCTACGAGTTCGCCGGCAAGTGCGTGCCCTTCCTGCTGCTCGCTTTCGCCGCCTTCATCGACGGAATCCTCATCGTGTTTGTGATGCGGCCGGCGCGGAAGGAGCGAGCCATGAACAAGGAGTCGTTCTCCGGGGGCACGCCCATCTACCGCCTCATCATGGACCCGTACATCGCCGTATGTGCCGGGGCGCTCGTCATGGCTAATGTGTCGCTCGCCTTCCTCGAGCCCACTATCGCGCTGTGGATGACGGATACCATGAACGCGTCGGAATGGGAGATCGGGATGGTCTGGCTGCCCGCCTTCTTCCCGCACGTGTTCGGCGTCTATCTGACCGTCAAACTCGTCTCCATGTTCCCGACGTACCAGTGGTTCATCACCCTAGTGGGACTGTGTCTAGAGGGACTCAGCTGTCTCATCATCCCCTTCTGTACTAAGTACATCGCCGTCGTCTTCCCGATCATGATCAACTGCTTCGGCATCGCGCTCGTCGACACGGCCATCCTGCCGACGCTCGGCTACCTCGTCGACGTCCGCCACGTGTCCGTGTATGGGAGCGTCTACGCCATAGCCGATATCTCCTACTCCCTCGCCTACGCCTTCGGTCCGGTGATCGCCGGCGGCATCGTCAACGAAATCGGCTACACGTGGCTGAACGTCGGCATCTGCCTGAGCAACCTGATCTACGCACCGCTGCTGATCGCGCTGAAGAACGTGCACAAGTACAACCAGTTCGACAACGAGGAGAACATCCTGCTCGACCAGCCGCCCGACCACGACTACAAGACGTACGTGATGAACAACCTGAGCGGGTCGACACCGAAGGAGGTCGACGTGCCGGCCAACGCCAACCATCTAGACGTAGGTAAAGCCAGCGACGGCAGGACGCCCGACGTTGTCGACTCGTGGAACGGCGTCAACGGGGGCACGCAGCGCAGGGCCTTCTCCAAGTCGTCGGACTCCGACTCCGAATTCAGAACCTACCACTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050930	Family	Major Facilitator Superfamily Vesicular Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23506	-	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005277	Molecular Function	acetylcholine transmembrane transporter activity	Interproscan
GO:0007268	Biological Process	chemical synaptic transmission	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0030121	Cellular Component	AP-1 adaptor complex	Interproscan
GO:0030122	Cellular Component	AP-2 adaptor complex	Interproscan
GO:0043195	Cellular Component	terminal bouton	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf9046_6.2 global RNA-seq network