Detailed information of PE_Scaf8603_0.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8603_0.2LYSINE-SPECIFIC DEMETHYLASEunanchor9785592415560-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21322KDM6_C-helLysine-specific demethylase 6/UTY, C-terminal helical domainDomainInterproscan
PF21326KDM6_GATALKDM6, GATA-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR046941Homologous_superfamilyLysine-specific demethylase 6, GATA-like domain superfamilyInterproscan
IPR048560DomainLysine-specific demethylase 6A/B-like, GATA-likeInterproscan
IPR048562DomainLysine-specific demethylase 6A/B-like, C-terminal helical domainInterproscan
IPR051630FamilyTranscriptional Corepressor and Histone DemethylaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14017LYSINE-SPECIFIC DEMETHYLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0031490Molecular Functionchromatin DNA bindingInterproscan
GO:0044666Cellular ComponentMLL3/4 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8603_0.2 global RNA-seq network
TOP