Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf8587_16.18 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 | Superscaffold5 | 23745461 | 23757711 | + |
CDS | |||||
PE_Scaf8587_16.18 | |||||
Transcript |
PE_Scaf8587_16.18 |
Protein |
PE_Scaf8587_16.18 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00773 | RNB | RNB domain | Domain | Interproscan |
PF13086 | AAA_11 | AAA domain | Domain | Interproscan |
PF13087 | AAA_12 | AAA domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001900 | Domain | Ribonuclease II/R | Interproscan |
IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
IPR022966 | Conserved_site | Ribonuclease II/R, conserved site | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR039691 | Family | Zinc finger CCCH domain-containing protein A/B | Interproscan |
IPR041677 | Domain | DNA2/NAM7 helicase, helicase domain | Interproscan |
IPR041679 | Domain | DNA2/NAM7 helicase-like, C-terminal | Interproscan |
IPR047187 | Domain | Upf1-like, C-terminal helicase domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR14928 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0004540 | Molecular Function | RNA nuclease activity | Interproscan |
GO:0035196 | Biological Process | miRNA processing | Interproscan |
GO:0035198 | Molecular Function | miRNA binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf8587_16.18 global RNA-seq network |