Detailed information of PE_Scaf8554_3.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8554_3.2LIM DOMAIN-CONTAINING PROTEIN JUBSuperscaffold75374070953746954-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR047172FamilyAjuba-likeInterproscan
IPR047247DomainAjuba-like, LIM domain 2Interproscan
IPR047248DomainAjuba-like, LIM domain 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR24219LIM DOMAIN-CONTAINING PROTEIN JUBInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0001666Biological Processresponse to hypoxiaInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0035331Biological Processnegative regulation of hippo signalingInterproscan
GO:2000637Biological Processpositive regulation of miRNA-mediated gene silencingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf8554_3.2 global RNA-seq network
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