Detailed information of PE_Scaf8464_0.4 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf8464_0.4SPRY DOMAIN CONTAINING SOCS BOX PROTEINSuperscaffold142454229124542914+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|F-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937F-box-likeF-box-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001810DomainF-box domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0060386Biological Processsynapse assembly involved in innervationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf8464_0.4 global RNA-seq network
TOP