Detailed information of PE_Scaf7902_17.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7902_17.3APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Superscaffold66334283663362251+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00051KringleKringle domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000001DomainKringleInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7902_17.3 global RNA-seq network
TOP