Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf7841_1.3 | TRNA PSEUDOURIDINE SYNTHASE D | Superscaffold1 | 41430885 | 41454100 | + |
CDS | |||||
PE_Scaf7841_1.3 | |||||
Transcript |
PE_Scaf7841_1.3 |
Protein |
PE_Scaf7841_1.3 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF01142 | TruD | tRNA pseudouridine synthase D (TruD) | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001656 | Family | Pseudouridine synthase, TruD | Interproscan |
IPR011760 | Domain | Pseudouridine synthase, TruD, insertion domain | Interproscan |
IPR020103 | Homologous_superfamily | Pseudouridine synthase, catalytic domain superfamily | Interproscan |
IPR042214 | Homologous_superfamily | Pseudouridine synthase, TruD, catalytic domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR13326 | TRNA PSEUDOURIDINE SYNTHASE D | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0001522 | Biological Process | pseudouridine synthesis | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0009451 | Biological Process | RNA modification | Interproscan |
GO:0009982 | Molecular Function | pseudouridine synthase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf7841_1.3 global RNA-seq network |