Detailed information of PE_Scaf7478_18.7 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf7478_18.7E3 UBIQUITIN-PROTEIN LIGASE SIAH2Superscaffold63329966833314182-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03145Sina_TRAFSina, TRAF-like domainDomainInterproscan
PF21361Sina_ZnFSina, zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004162FamilyE3 ubiquitin-protein ligase SINA-like, animalInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan
IPR013010DomainZinc finger, SIAH-typeInterproscan
IPR018121DomainSeven-in-absentia protein, TRAF-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45877E3 UBIQUITIN-PROTEIN LIGASE SIAH2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf7478_18.7 global RNA-seq network
TOP