Detailed information of PE_Scaf6534_0.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6534_0.3SECRETED MODULAR CALCIUM-BINDING PROTEINSuperscaffold1075492737572906-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00086Thyroglobulin_1Thyroglobulin type-1 repeatDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000716DomainThyroglobulin type-1Interproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036857Homologous_superfamilyThyroglobulin type-1 superfamilyInterproscan
IPR051950FamilyDevelopmental regulator and protease inhibitorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12352SECRETED MODULAR CALCIUM-BINDING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6534_0.3 global RNA-seq network
TOP