Detailed information of PE_Scaf6149_2.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf6149_2.3VITELLOGENIN-RELATEDSuperscaffold25344788153486049+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF08742C8C8 domainDomainInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23345VITELLOGENIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf6149_2.3 global RNA-seq network
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