Detailed information of PE_Scaf5944_2.10 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf5944_2.10UNCHARACTERIZEDSuperscaffold122136580521411314-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11789zf-NseZinc-finger of the MIZ type in Nse subunitDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004181DomainZinc finger, MIZ-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR026846FamilyE3 SUMO-protein ligase Nse2 (Mms21)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR21330UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016925Biological Processprotein sumoylationInterproscan
GO:0019789Molecular FunctionSUMO transferase activityInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0061665Molecular FunctionSUMO ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf5944_2.10 global RNA-seq network
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