| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf5681_1.8 | VESICLE-TRAFFICKING PROTEIN SEC22B | Superscaffold10 | 46912368 | 46922361 | - |
| CDS | |||||
| PE_Scaf5681_1.8 | |||||
| Transcript |
| PE_Scaf5681_1.8 |
| Protein |
| PE_Scaf5681_1.8 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00957 | Synaptobrevin | Synaptobrevin | Family | Interproscan |
| PF13774 | Longin | Regulated-SNARE-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001388 | Family | Synaptobrevin-like | Interproscan |
| IPR010908 | Domain | Longin domain | Interproscan |
| IPR011012 | Homologous_superfamily | Longin-like domain superfamily | Interproscan |
| IPR042855 | Domain | v-SNARE, coiled-coil homology domain | Interproscan |
| IPR044565 | Family | Vesicle-trafficking protein Sec22 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45837 | VESICLE-TRAFFICKING PROTEIN SEC22B | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000139 | Cellular Component | Golgi membrane | Interproscan |
| GO:0005484 | Molecular Function | SNAP receptor activity | Interproscan |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0005793 | Cellular Component | endoplasmic reticulum-Golgi intermediate compartment | Interproscan |
| GO:0006888 | Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | Interproscan |
| GO:0006890 | Biological Process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Interproscan |
| GO:0012507 | Cellular Component | ER to Golgi transport vesicle membrane | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0031201 | Cellular Component | SNARE complex | Interproscan |
| GO:0048280 | Biological Process | vesicle fusion with Golgi apparatus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf5681_1.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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