Detailed information of PE_Scaf5638_5.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf5638_5.2EGF-LIKE DOMAIN-CONTAINING PROTEINSuperscaffold34013767440165094+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF05345He_PIGPutative Ig domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000082DomainSEA domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR005533DomainAMOP domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051830FamilyNeurogenic locus notch homologInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24033EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf5638_5.2 global RNA-seq network
TOP