Detailed information of PE_Scaf5330_0.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf5330_0.5DYNEIN HEAVY CHAINSuperscaffold121104397611088279-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12774AAA_6Hydrolytic ATP binding site of dynein motor regionDomainInterproscan
PF12775AAA_7P-loop containing dynein motor regionDomainInterproscan
PF12777MTMicrotubule-binding stalk of dynein motorDomainInterproscan
PF12780AAA_8P-loop containing dynein motor region D4DomainInterproscan
PF17852Dynein_AAA_lidDynein heavy chain AAA lid domainDomainInterproscan
PF17857AAA_lid_1AAA+ lid domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR024317DomainDynein heavy chain, AAA module D4Interproscan
IPR024743DomainDynein heavy chain, coiled coil stalkInterproscan
IPR026983FamilyDynein heavy chainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035699DomainDynein heavy chain, hydrolytic ATP-binding dynein motor regionInterproscan
IPR041466DomainDynein heavy chain, AAA 5 extension domainInterproscan
IPR041589DomainDynein heavy chain 3, AAA+ lid domainInterproscan
IPR043157Homologous_superfamilyDynein heavy chain, AAA1 domain, small subdomainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45703DYNEIN HEAVY CHAINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf5330_0.5 global RNA-seq network
TOP