Detailed information of PE_Scaf4308_6.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf4308_6.3CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPSuperscaffold143679147336809073-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011004Homologous_superfamilyTrimeric LpxA-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013784Homologous_superfamilyCarbohydrate-binding-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR039675FamilyCartilage intermediate layer protein 1/2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15031CARTILAGE INTERMEDIATE LAYER PROTEIN CLIPInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf4308_6.3 global RNA-seq network
TOP