Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf4308_6.3 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP | Superscaffold14 | 36791473 | 36809073 | - |
CDS | |||||
PE_Scaf4308_6.3 | |||||
Transcript |
PE_Scaf4308_6.3 |
Protein |
PE_Scaf4308_6.3 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
IPR011004 | Homologous_superfamily | Trimeric LpxA-like superfamily | Interproscan |
IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
IPR013784 | Homologous_superfamily | Carbohydrate-binding-like fold | Interproscan |
IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
IPR039675 | Family | Cartilage intermediate layer protein 1/2 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR15031 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf4308_6.3 global RNA-seq network |