Detailed information of PE_Scaf4003_2.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf4003_2.5BEIGE/BEACH-RELATEDSuperscaffold81476799914838315+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan
PF20426NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000409DomainBEACH domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR046851DomainNeurobeachin, beta-propeller domainInterproscan
IPR050865FamilyBEACH Domain-ContainingInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13743BEIGE/BEACH-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf4003_2.5 global RNA-seq network
TOP