Gene detail

Detailed information of PE_Scaf2857_0.7 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf2857_0.7	IMIDAZOLONEPROPIONASE	unanchor3685	1329	5966	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf2857_0.7

GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTAGCTATTTTGGGTGGGTATAGAGGCTTGAACCAGCAAAGCACTATGTTTTTGTACTTTGCGAACTTATGAGACGATGCTTTATATAGTTGCATCTTCGACGCATTGGTTTGTTGCTATCGCCCCTGGTTTCCAGAGACAAGACGGCGCAAGAGGCGACGACAGACGTCATCGATGTCCAGCTGCCCCGACTGCAGCAACTGATGGACAGCGGTCAGCTACACGTGGACAACATCGACGTGTTCTGTGAGCAGGGAGTGTTCAGTGTCGACCAAACCAGACACATCCTGAAGGCTGGTACGAAAATGGGACTCGCCATCAACTTCCACGGTGAAGAACTGCACCGGTTGAATTCAGCCGAGGTAAATTGCTAATATCACTCGGTGGCAATAGTACGAGCGGGAAAGCGACGACGGTCGTTTACGTCGTATATATAGGCAATAACTTAGTCAAATAATAAAACAATACTACAATCGAACCTCGGTTTACGGTCCCCCGGTAATCCGGTCACCTCACCATTAAGGTCACTTTGGAACAATCCTAAATTATTTATATAGTAAAAGATAGGACGTTGGTCCCGCTAATCCGGTCACCTAGCTATTCGGGAATACGGTCAATAACCCAGTGCAAAATGGTGAGATTGACTACGGGCAATATCATCATTTGACTGACGGTCAGTCACAGTCGGGAAGCCAAGATTGGCGGTTGACGCGGCCGAACAGCGTCCGCCCACCAAAGGCGACTCCAACAATGCGAAGCCATGAACTTGGCGTCTGGCATATTGAAAACAATATAAAAGATGCAAGAACCCAGTTTTCTTTTGCCTTTATGTTGCACTTGGAAGTCAAATTCTTAGTGGCTGAGCAGATTTACAGACAAATGCGAAGGCGCGGAAACAACGCCAGTGGGCCACTGGAGACATTGGAGTGGGTTTCGACTTCGACATCATGACACCGCTTGATAGGCGCCTGGGTGTTTATTTAATGATCGAAGATGTATGTTTGGAGTAGCATATATGTGTCTTGATTTTGAAAAATAATAAAATGTGTTTTGTAAATTGTTGTAAAACTAAATCATGTTATTTTACTGGCGCGATCGAGTGGTATTAGGTTACCCATAATATATATTGGCGCCTATGGTGGATATTATAAAACTTAATATATAATTAAGAGAGTTCGAACTGTTTGCTTTCAAGACACCGCCTGCTTAATCAGCAAATATCAAAAGAAATATCATGTCAGTAAATAATATATTGCACCAAGAATAACGCTTAACAAAATCCACAACGCTAACAGTAGCATGAACACGCACACATCGCGTGTTGCAGGCTTATGAGCATGTGGGTGTACATATGTTAACTGTAATCAACATTCCCGTTGACCGATTCATCAGACAAATAACTGTGTCCTGCAATAAAACACCACACATGCCAATATGATACACTTCATTGCTGAATGTTCAGTGCAGTTAAAATGGCATGCATGTGTAGGCCTATGCTCCCTATATGTAGGCCTATGCTCCCTATAGGCTACAGCAATGTTTCCAATTCTCGAGATGGTTCAGTCAACAATTCAGTATTACGGTCACCTCGCTATTAAGGTCACTTTAGTCCAGTCCCGTGGATGACCGGTTTGTAATATCGATATTCCACTGTATTAGTGTAGGTCATGTACAGTACATAGTTTCCCGACAGAAGTTGGCCATAGGCGGGTCCAGGAGGTCCCCAGACCTTTGGAAGTTGGCGTGCACGTAGACATTTTGAATGGACCCACGTGACCGTGCCCCCGAAACCCTTGGAAACGTGCCCCCGTTCAGTTTACATCACGTGAAGTTACGCCGACGCAGCAGCGAAAAATTGTCAACAGCACTCCTCTCCCCCGTCTTCCGATTGCGGAGATGCAACATTATTCAACACCATTGGTTCGGCCGCCAGTTGAGTTTTTTGTTTACTTGTAGATGGGTGCGGAGTTGGGGGCCCGTGCCATCAGCCACCTGGAGAAGATCTCGGAGGCCGGCATCGAGGCGATGAGACGAGCGGGCAGTATCGGGGTTGTGCTGCCGACCACCGCCTACATCCTGCGCTTGACCCCGCCTCCCGTCCGCGCCATGATCGACGCCGGCATGGCTGTGGCGCTTGGCAGCGATTTCAACCCCAACGCACATTGTCTCGCTATGGTAAGTCTACTCTACTTATCGTCCGCATTTCTGATCCATTGAAATGAGGCGCGTATCTGCGAGTATTACCAGCTGTCAAGCTACTAACTTATTCAATAGTGTTGAACCTCGATCAAAATGTTATCTGTTATCCAAATGAATGGTTTATATGAAGTGCCGTCTTCGCCATATATACGATGTCCATCTTCGTGACACCACATTTACATACACAAGCAGAATAATAACTGAATTACTAGTTATGGCGTAGTCCCTTCACCAATGGTAAACCGGGATACCACTGAACGCCATACCTTTTGCTCAACGCTGTGTTGTGACTGACGCCTCGAGCAACACAAATTACACTCGTTGCATGTTTGTTCAACGTTCAAACAACTCTGCATAGAGCACACGTCTGCTTTCCTGTTTCGGTGTTGTTCTTAAAAAAACTACACAGGGAATCGTGGCGTGTTTCTTCTGCGTTTAAGGTAGTTCGGGTGACGAAATAGGAAGTAACCCATACAACATTGGGTCAATTTAACATCATAATTGTTACTAGGTGTTGCAATACATCATTACATTACACTGGCACAGTAGTTATACGTAACTGTGTGTACAAAATCTTGGTCATATTGTTTACTGGTGGTTTGCTATCTTTATTGTACATCGATCGACGTGACATAAATCAATTAAAATTCATCATTACTTGAGGTTATATTAATTGTAAACTGCAGTTACTACTGTAATTGCTCATACATGTGTTATCCCTTCCAGCCGGTAGTAATGCACCTAGCCTGTGTGTTGCTCCACATGAGTATGGAAGAGGCGCTCGTAGCAGCCACGATCAACGGTGCCGCATCCCTCGGTCGGGCCGACAGTCAGGGCTCCCTCGAAGTCGGCAAGCAGGCAGATATATTAATACTGGACGTTCCAAGGTAGGCTCATGGAATGAACATTTGTTAATTGATTATAGTATATTTACGTTCATTGTAATCACGTTTGCAACAATAAATTTTCTGTGATATATTATAAGTAAAACCATCACTTACTAATCGTCGCGTTTTTATGGTGAATACCAAGTTGATAAGCAACCCCACCTCATCATTGGTAAACTGAATCATGAAGTCGTATTTACGGTAACTTAAACACAAGGTGTTTGGAGGACACTGCTATAGTAGCAGTACTGTGGATGTGCCGACTTCAAGGATCGTTTTTTTACCGAGACTCCCTAGATCAAGGGTCTGTTTTTCATGTTCTCCCTAGAACAAGGGCCAACATTATACAGAAGTTCCCTAGACAATTAAGGGTATCATTTTGAGTAACTCTCCCTAGAACAAGGATAGGTTTTTATCGCAGTATTCACGGCCCGGGGGAGCACTGCCTATACTAGCAGTACTGTGGATGTGCCTACTTCAAGGGTCCTTTTTTACCGAGGCTCCATAGATCAAGGGTCTGTTTTTTTACATGTTCTCCCTAGAACAAGGGTGTACTTTTTGATATTGGATGCCCTTATCAAGGCTAGGGGTATGTGACCTCCAGCTGCACACCCCTACACACATGTAAGGGTAGTGCACCACCCCTGGGAACACAGCACAACTTCAACAACCACAGAAGACCCCTTTAAATTTGTTTTCAATTTATTACCATGACCACAGATTATACTTTACTAAAGAGGCATCATGGGTTTGAAATTATACAGGTTTAGACCAACTACAAACAACAACACAGGATAGACATAACAGTGATGTATTATTTATGTATGTTGATGTGTGATGGCAGTGCAGGAAACAACTTTAGAAGAATGTTTTATATTTCAGATGGGAGCATCTCATCTACCAGATGGGCAGTCACCAACATGTCATCAGGCATGTTGTCAAGAATGGAATAGTTGTACACAGCCGGGTGGAGACTTGAAATAAAACAGTCCACAACACCAAGTTTCGCTTCCGTGCAGGCTACTGATGAGATTATAGTTCACTTGCATCCATTGTATCTTCACGCCTAGGAAGAACACATAGAAAAAATAAACATCTGGCAAAAGCAATAAATTTTGAATACACCCATTAATCAGTGATGATAATGCTATACAAGATCATAGGGCAGAAGCATTCTGGAACTGCTAGATTCTTTCTTTTGTTCAATAACCTGCCAATGCCTGTCTTTATGCATGAATAATATATTACATCAACTGTTTCAGTGGTCAACTAATAAACATGTGAACAAATAAAAAATGTAATTTTTTAAATAAAAGTTGTAAATCATGACATAAGTAGAGCAGAGATTTCTCTACAAATTGCCTGGTTGATGTCAAAAACTTAAAATCCTAACTTAAATCAAGATAAATCGCATGGGTGAGCTAGTTACATTTTGGGTATCTGAATTAACCCAATCAAAGCATTTTAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07969	Amidohydro_3	Amidohydrolase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005920	Family	Imidazolonepropionase	Interproscan
IPR011059	Homologous_superfamily	Metal-dependent hydrolase, composite domain superfamily	Interproscan
IPR013108	Domain	Amidohydrolase 3	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42752	IMIDAZOLONEPROPIONASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006548	Biological Process	L-histidine catabolic process	Interproscan
GO:0016810	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	Interproscan
GO:0016812	Molecular Function	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	Interproscan
GO:0019556	Biological Process	L-histidine catabolic process to glutamate and formamide	Interproscan
GO:0050480	Molecular Function	imidazolonepropionase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf2857_0.7 global RNA-seq network