Detailed information of PE_Scaf284_16.11 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf284_16.11WD-40 REPEAT PROTEINSuperscaffold61533004515382551-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF03451HELPHELP motifRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR005108Conserved_siteHELP motifInterproscan
IPR011044Homologous_superfamilyQuinoprotein amine dehydrogenase, beta chain-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR049813DomainEchinoderm microtubule-associated protein-like elp-1, trimerization domainInterproscan
IPR050630FamilyWD repeat Echinoderm Microtubule-associated Protein-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13720WD-40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008017Molecular Functionmicrotubule bindingInterproscan
GO:0072686Cellular Componentmitotic spindleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf284_16.11 global RNA-seq network
TOP