Detailed information of PE_Scaf2641_2.10 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf2641_2.10HISTIDYL-TRNA SYNTHETASESuperscaffold132053136420552815-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004154DomainAnticodon-bindingInterproscan
IPR004516FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR015807FamilyHistidine-tRNA ligaseInterproscan
IPR033656DomainHistidyl-anticodon-bindingInterproscan
IPR036621Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR041715DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11476HISTIDYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004821Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006427Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf2641_2.10 global RNA-seq network
TOP