Detailed information of PE_Scaf1994_3.19 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1994_3.19SWIM-TYPE DOMAIN-CONTAINING PROTEINSuperscaffold23689175636898344+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF21056ZSWIM1-3_RNaseH-likeZinc finger SWIM domain-containing protein 1/3, RNaseH-like domainDomainInterproscan
PF21599ZSWIM3_NZinc finger SWIM domain-containing protein 3, N-terminalDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR048324DomainZSWIM1/3, RNaseH-like domainInterproscan
IPR048325DomainZSWIM3, N-terminal domainInterproscan
IPR052579FamilyZinc finger SWIM domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR31569SWIM-TYPE DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1994_3.19 global RNA-seq network
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