Detailed information of PE_Scaf1767_0.3 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1767_0.3COLLAGEN ALPHAunanchor566213212412+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF01414DSLDelta serrate ligandDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001774DomainDelta/Serrate/lag-2 (DSL) proteinInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for PE_Scaf1767_0.3 global RNA-seq network
TOP