Detailed information of PE_Scaf1648_0.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1648_0.2LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1Superscaffold101447662114515269+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF01437PSIPlexin repeatFamilyInterproscan
PF12947EGF_3EGF domainDomainInterproscan
PF13418Kelch_4Galactose oxidase, central domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR002165RepeatPlexin repeatInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR016201DomainPSI domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR051568FamilyLZTR1/AttractinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46376LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1648_0.2 global RNA-seq network
TOP