Gene detail

Detailed information of PE_Scaf12623_1.3 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf12623_1.3	PDF RECEPTOR-LIKE PROTEIN-RELATED	Superscaffold1	68420844	68422828	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf12623_1.3

TCACCCATCATATAGCAACGATGGTTCCCGCACCCTTCTCCATCACGATCTATTCACAGTGGGTTGTTTCCGCCTTGCAGGGGTTCCTAGTTGCAGTACTGTTCTGCTTCTTGAACACGGAGGTAAGTCAAAGAACCGTTACCATTACAAATAATTCAAAACTGTTCCGATTATATTTTGTGTGCGTAAATAGTTAAATTACATGCGTGGTAGGCTTAATAACTGTGCGTTCTTAAAACACTACGCAAGTCATTGATCGTTTAATTGGGTAATTTATTAAATTGGGATATGTATAATGTTACCGTGTAAGGTGCCGGATAACGGTTTCCAATTTTTCGCCGATTTTTTATTTTATTTTAACAGACATAATATATTAGTTTTCAGATGACATTGTGAAATCTAAACACGACTTTACCAACAATGAATTAACAGGAGTGGTCATTACTATATTGGTTATATAGTTCGCGGAAATAGTATATAGCACAGTAGAAACATCGAATAGGGGTAGGAACGCTTCAAGTAGCACATAGTGCGCTTTAAGTAGCACATAGTGTGTTGTGTCTCCACCTGTTGAGTACATCTCATACCATAATAATTAGTTTGCAACAACTCCGCTTGTGGCGACCCTATCCACGTTCAGATGCGTTTGGTTGTTACAGGTACGCTCCGAAGTACGTAAGACATGGGAACGGTACCGGATGCGACGTGATCCCAGCTGGTCACGTGCGCCGGTCCACAATTGGAACACCCTGTCCAGTTACGTGACACGCACGCGCTGTTCAATTCACTCGCTGACCGAACGCGACCACTGCATCTCGAGCAGCGGCCGCGTCGCCAAAAAGACGTCGCCGGAACTGAGCAATGGAACGGCGCTGCAGACGATGTCAGGACGCGTCAAAAACGAGGATCGGCGTAACGGAAACGAAAGTGTGCATTTGATGTCTGGCATTCCAGAGGTCAGGGGTCAGCAACATGGCGTCCCGGTAAACGAAAGTGTACCGATGATGATGACGACAAAAACTTAGCGTTTTGTCTTAGCAGTACCACGCGCTTTGTGCGTGGCGGAGCATATATTTATATACACATTGTGAGCGAGTTGCTTACAGAACAGGGACATTCGTGTAATGAACCAAACACATGAGAGTTTTGCAGGGGCAGCGTATGTATATTTGTGATATTCCGCTAGCCGAGTGAGGGCTAATGACAATAGCTTTAAATTATATTGTGGCCGAATGGTTGGTTTCACTCGAGCGCTGCATCTGTCTGATGTTTTAATGATGATATCTGCACATCGTATCTTGCCTCCTATTTGCTCATGGTAGCACTGATTACTAATAAGTTGGGCTGCCACATTGTCCAACAGTGTAAATACTATTGTGGTGGACACCAATTCATCGGGTATTTTTTTTACTATTTTTATATATTATATAATAATGTAGACGTTACGTTCGCGGCACAAGCTGCCGTCGTAATATATATATATATATATATATATTAAATATATATGTATGTGTGTGTGCGTGTGTGCGTGTGTACCGTTAATTATTGATTGCCATCAGGAATAAACAGTCAGTCTATTACAGGAGCATTAACGACAATGCCGGTACAAGTTAACTTTACGAAAACAATGAAAGAATAATTTTAGAAATGGATAGAGTACGACATTTACGTTGTAAGCGGTGCGACGCTGCTCCGTAATGAAGTTGTTATGGAGAAGAATATTAATCTTTGCCAAAAGCGGATGTAGATGAGAAAAATTGGAAACGCAAGTATAAAATCATGTCCAGTGGAATGCAGTCGCCAATGTCCAGTATTTTCTGTAGTGCCGTAATTAAACTTACGTCAGGAAAGAGCAGAGAAACAGCTTCTCGGATTGTATTTTTTTGCAAGACGGCCAGCAAGTTTAGACAAATAAAACACACACACGCGCAAACACGCACGCACGCAGGCACTCACACACCCTCACTCACTCACTCACTCACTCA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR017983	Conserved_site	GPCR, family 2, secretin-like, conserved site	Interproscan
IPR050332	Family	G-protein coupled receptor 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45620	PDF RECEPTOR-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007188	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan
GO:0008528	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0017046	Molecular Function	peptide hormone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf12623_1.3 global RNA-seq network