Gene detail

Detailed information of PE_Scaf12243_0.6 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf12243_0.6	BLEOMYCIN HYDROLASE	Superscaffold9	50112959	50117487	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf12243_0.6

ATGTTTCAGGTGGAGAGTGAAGGAAAGCCAATGACCAACCAGAAGAACTCCGGTCGGTGCTGGATCTTCGCTGTACTCAACTGCATGCGCGTTCCTCTCATGAAACATCTCAAGTTGGAAGAACTACAACTCAGCCAGAACTACTTGTTTTTTTATGATAAGGTAAGCTTTTAAATTGTATATTCTAGCGGATTGCCTATGAGAGCTGGCAAGTTGTCATGACTGGACATAGGTATAGTCATATCTCAGATTACAGGAGTCTTCATGGTAATGATATTTGTCAGTTGTTTGGATTTTCCACACGTACCAGTACAGTGTTTCCCCTGGTATATAACAAGCGAGGCGGGCCGCCTCGCCGTTTTTCTATGCCGCCTCGTCCAAAATATGCCAAAATTGCCGCCTCGTAGCTATTTCATACGCCCATTTTTTTGTTCTTTCATGATATGTTCAGTGTCGGCGAGCGGCGCGTAATGACACCACAAAGTCACTTATATTCCTGCAAAATTGTAGCAACATCGTTTAGCCGTCATTGGAAAACGTGAAAGATATCACTTGTCAGTTGTGCAATCACTGAATATTCCTCCGGTATCCCCGGTGTCTCCAATGGTGACACCCTGCGGAGTTTCGACATACTAGAAATCTAGACATTCATGTAAAATGGCGCCCAAACGGTAACTTGCGTTTTGGTTTATGACGGTGGTGGGAGTGAAAACCGTGCAGGTTGATGGCACTACGTCACTTGTCGACACTTGTATCGAATCCGGACTCTTTTGAAGCCCAAATAAAAACCGTGCATCCTAATCCTATTCACTAGTCGGCATTTGTATCGAATCCGGACCCTGTTGAAGCTCAAATAGCGACCCGGTTTGCGCTAGTCTGTGCCTCTGCGGCTGTGCGTTACGCACATCGCGCGTAAAAAGATGTATATATATAGCAGCGTATGTTGATACAAACCGGGGCGCTATTTACGCCTCAAATGGACGTAAGACGCTATATTCTTAAAGGTAAATATGCCTAGGAAAATGTTGAATGATGGAACTACAGTGTATCTCACTGAGGTATCAAAGTTAAGCAAAACTCATGCGGCAAAATCAATGACAAAGTGGGTCCGGATTCGACGCAAATGCCCACAAGTCTATTCAACTAGTGTTCTATGCGGTTTTGTTTTAGCAAAATAAGGAATGTGATTCATAAGATATCTTTGTGCTAAATATATAATACATATTCCGACAAAGTTGTGCAAACAAACTTTTGGGAAAGTTTATTTGAGTGAAATACTTACGAATATAAACCACCGAAGTTCACATCTCATAAAAAAATGCCTACTACCCAAAACCGTGTATACTAACGGGTTATCAATAACTTGGGTTAGACAATGATATGTTTGCACAACAATTGGATGTACTAAACAACTTATAATGTTTTATAAAAAAGACACAATTTGAGAAACATTCTTGCGATTAATAGAAACACACTTTTGTGGCAATCCAGAAATGACTGTTTAATTAATTGTATAGCATTCTAGCAAACAAATAAAATATAATCTTTTGAACATAAACCACCAATTTACCATAATATGATATTAAAATAATTTAAAGGTAATGATGAAAGAGTCTTCAGATGATACCACTGGATGCTTCCCAGAGAAGTCGAGATGGTGTTCGACTGAACAGGTCTGCCAGGGAGTAAAGTGTAAAGCGCTTTGAGCAGTCCTGCGCTATATAAGAACTTACCGTTTACTTTTTTAGTGACTCTGTCAGCGAGGTAACAAGGCCTAGGGTTAGTGCAAGAAAACATAACCATAACCAAGTACCAGTGGTCAAGTGGAAACCACACCTCTACTGAGTAGCAGTGGTAAAATGGAAACCACACCTCAACATGATGAAACAATCATGATTACTGACTTTTATCAATCATGATTACTACATTTACAAGTAGTGTCTTTTTTATATCTTCCCCTCTATATTCAAGAGTAAATGTTAAAACATACCTCAGAATGCACCATTTTAAAGCTAGTTTAAAAAAAATCTATGGGGGAGCATGCGGACCACCCCTAGCAACCTAGAAACAGACTAGGCAACACTTTGTGCCTGCGGTGCTCGCTTACCCCACCCCTACCACCTCGCCCATCATTTCACCCAGGGGAAACACTGCAGTATATGGTATACCTTGCTATAGATACCCTGGTATATGAAACATTCACTCACAACATTCCGGTTAGTTCTGTACTAACAGTCTGACACAGCTAAAAGTAAAACGTCAGACCCATATTTCTCAGACAGCAATACAGTGGAACCAGTCTTGGGTGACCAGCTCTTCTGCACAGCCAAAGTGGTCGTTCAAGACAGGTGGTCCCCATGGCAGGATGCAGATATATAACCAGTTTATATCGAACGATGGTTGATTAGATTTTATTTATTCTCAAAGTGCTGAATGTGTTTGTTACCTGTATATCTTTCAGCTGGAGAGGTCCAACTACCAGCTGCACGTGTTTGTGTAGGAAGAGTGTCCTGTCCACTGTGTCTGTGGAGGAATAGTGTCCATTGTGTCTGGAGAAATAGTGTCCACTGTGCCTATGGAGGAATAGTGTCCACTGTGCCTGGAGGAATATTGTCCACTGTATTTGTGGAGAAAGTGTCCACTGTGTCTGTGAAGGAATAGTGTCTACTATGTCTGTGGAGGAATAGTGTCCATTGTGTATGTGGGTGAATAGTGTTCACTGCATATGTGGAGGAATAGTGTCCATTGTGTCTGTGGAAGAATAGTGTCCATTGTGTCTAGAGGAATAGTGTCCACTGTGTCTGTAGAGGAATAGTGTCAGCTATGTTTGTGTCTGTGTAGTTAATACTAGTAATAGTGTCCGCTGTGTTTGTTTCAGTTGGAGAGGTCCAACTACCAGCTGCAGGTGTTTGTGGAGACAGCTCATAACAAGGAGCCAGCTGACGGTCGTCTCGTCCAACACCTGCTGAAGACCCCCTCCTCTGAGGACGGGGGTCAGTGGGACATGTTGGTGGGCCTCATAGAGAAGTACGGCGTCATGCCCCAAGACTGCTTCCCCGACACCTGGACCGCTCAGGCCTCGGGGAAACTGGGTGTTCTCATGAATACCAAGGTACAGTGGTGTCGTGGAAGGAAATAAAACTACTTTTGTACTCTACTTGAGTAGATTTTTTAGTAATTGACAAGTAACAAAGTACAATTTCTACTAACTACTTACACTTGTAACAAAATTGTTTTATTTAAGGTAATACTAATACTACAACAATACTTAGCGATATTTATTTTTGTTACATTTTTGTCTGAACTAAGTTGTCTGATGGTGCTCCGCCTGTGAACAATATTTCATAAAACGTATTTAATCACCAGGAGGATCCTATCGCGAGGCCAAAAGCTATTCATATTATTAAGTCGCGGGCCAGTTTGCAATTCATGTGTACTTTAGAGTTAACAGTAGTTATTTTAATTTTGTCTTATTTTTTGTTCGCTGATGCTGTAATGGTTACTGTCTTGACAATAAATCTTTACATTTTACTGTTACTTTAAAGTGCATTTTGAATGTAGTTTTTTACTCTAGTAGGTTTACTAGAAGGTACTTTTACTCAAGTAGTTCTGAGGTGGATTACTTTTGTTTCTACTCAAGTACAAAAAGTAATTCAGTCACCAGTAAGTATGGCATCTTTCCTGAGGTAATAAATTTTTTTGTTAGCTCAGGTTTGAAATTGCATGTTCACTGTGAATCTTTGGCGGTGCCTTGCTGTGGTGGTGACTGGAATGTGTCCGTGTTCAAGATGATTCATGTTTGGTGCCTGGTTTAGGCGATAGATGTTATAAAAATAGTATTATTACTTTAGCATGATTAATGCTTGTAAGGTGTTAAAAATATTTATTGCTGCTGTTGCAATAATGTTCCACTTGTTTCGCAGAATTTTCATATTTTCTGCAGATATGCCATTTTTGGTTGACATCCGTATTTTGTACTAAAAATTCTCCATTTGGCCATATAAATCCATAACAAATTAATTTGTTAACCAGCCTATCGTGTTGTTATTCTGGTCAGTTGTTATCACAGATTATAACATTTGTTTACCAACTGGTACATCAAACAAAATCAACAAATATTTAAGAAAAATTGTGCAGTATGAAATAATATTATATGATGAAGCCAAGAAAATCTTAACTTTATCATGATTTTTCCATTTGAAGCTAATCCATATTAAAACGTATTCCTCCCCAAAACAAGAAAATCCATATTGGATATCTACAGATACAATGTGACAGCTAAGAATTGGCCATAAATAATACTTGAATGATGCAAAGTATAGCAGTTGTCATCATGAAATAAGGAGGTATGACCCCAATTGTACTCTTCTTATTGTTAATACTTGAAGGTGGTTACTTAATTAATTTCATTCCAACAGATGCGTGAATTTTGCATGCGTTTACGCCATCTGGTGGAGAAGGGTGTTGATGATGAGACGATAAAGAAGGAAAAGGAAGCAATGATGGAAGAAGTAAGTGTTATTGTATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03051	Peptidase_C1_2	Peptidase C1-like family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000169	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR004134	Family	Peptidase C1B, bleomycin hydrolase	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10363	BLEOMYCIN HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004177	Molecular Function	aminopeptidase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0009636	Biological Process	response to toxic substance	Interproscan
GO:0043418	Biological Process	homocysteine catabolic process	Interproscan
GO:0070005	Molecular Function	cysteine-type aminopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf12243_0.6 global RNA-seq network