| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf12201_0.9 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 | Superscaffold11 | 50959412 | 51006906 | - |
| CDS | |||||
| PE_Scaf12201_0.9 | |||||
| Transcript |
| PE_Scaf12201_0.9 |
| Protein |
| PE_Scaf12201_0.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09333 | ATG2-VPS13_C | ATG2/VPS13, C terminal domain | Domain | Interproscan |
| PF16909 | VPS13_DH-like | Vacuolar-sorting-associated 13 protein, DH-like domain | Family | Interproscan |
| PF21679 | VPS13_C | Intermembrane lipid transfer protein VPS13, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015412 | Domain | Atg2/VPS13, C-terminal | Interproscan |
| IPR026847 | Family | Vacuolar protein sorting-associated protein 13 | Interproscan |
| IPR031645 | Domain | Vacuolar protein sorting-associated protein 13, DH-like domain | Interproscan |
| IPR049424 | Domain | Intermembrane lipid transfer protein VPS13, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16166 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006623 | Biological Process | protein targeting to vacuole | Interproscan |
| GO:0019898 | Cellular Component | extrinsic component of membrane | Interproscan |
| GO:0045053 | Biological Process | protein retention in Golgi apparatus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf12201_0.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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