Detailed information of PE_Scaf12157_5.13 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12157_5.13TRANSCRIPTION INITIATION FACTOR IIH-RELATEDSuperscaffold61079753910815189+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03909BSDBSD domain DomainInterproscan
PF08567PH_TFIIHTFIIH p62 subunit, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005607DomainBSD domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013876DomainTFIIH p62 subunit, N-terminalInterproscan
IPR027079FamilyTFIIH subunit Tfb1/GTF2H1Interproscan
IPR035925Homologous_superfamilyBSD domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12157_5.13 global RNA-seq network
TOP