Gene detail

Detailed information of PE_Scaf12099_1.7 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf12099_1.7	SERINE/THREONINE-PROTEIN KINASE	Superscaffold12	34304098	34309644	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf12099_1.7

ATGCGCCAGGACTCGATGGACCCAAACATGAACTGGGACAAGGAGCTGTTGAAGCCCTTGGAACGACGCAAGCTGCGCCACCAACGCTGCCTCGCTCACTCTCTAGTCGGCACTCCCAACTACATCGCACCAGAAGTACTGCTCAGATCAGGTGGGTACACTCAGCACGGGACCAGTCGTACACCCTGGCTCAATTCTAGGTAGACTTGTAACGATTGTATCAGTGCCTGGCTCCTCTCAGTGCTATCTATATAACATGTTCCTCTGGTGCCTATCCACCCACTCCACTCAACCCATCCACTCAACCCATCCACTCAACCCTTCCACTCAACCTATCCACTCAACCCATCCACTCAATCCATCCACTCCGCCCATCTACTCTACCTGTTCACCCCACCCATCCACTCTGCCCATCCGCTATACTCCACCCATCCACTCCACCCATCCTCTCTGTCCATCCGCTCTACCCATCCACTCTGCCCATCCAATCCACCCATCCGCTTCACTCCACCTATTAGACTGCCCATGGTGAATGACAAGGTCGTTATTTGTAAGCAGATAACAGTCAGATTAAATTTAATAATTATAGTTAATTAAAACACATTTTGCAGAGCAAGAAGTTATAATAGATAGTTTATTATATATAACATGAGTGTGGGATAAAAACAATTGGACCTTTGAGGTTATTGACAACGAGCCAGTCAGTTACTTGTCCATCAGCAGTGGGGTGGGGTAGATATACCGGTGTATGTCACTGCCAGTTGCAGGATCATTGAGATATTTTTAGCAAAAAAAACTGGAAATGTCAACAAAAGTCCATCCTGATTGTTTGAAATATTTCCCACAAGTTTGAGTGTTCATTCTCATAACTTACTGCTGTAGGTTATTTTAGAATAACATGGCAAGATTTATTTGTAAAACAAGTGTTCCCAACCTGATAAAAAGCAATAACAGATAGTATATTTTATTTAGAAGAATGTTTCTAATGATTTCTTCTATTTAGAAGACTGTCTCTAATGGGTAACACATCACATTACTTCAGTGTAGTTTTATTATGTATCAGATATACATCCACATATGTATGGTATGGTGAAAAGTTCTCCTCACAAGAAAAACTGCCAGAGCTAGAGAAGTCAACAAAGAATCAAAAGTTTTGTAAAATTGAAAGAGCCCATTGATTCTTGCATTTAAAATAGTCAAAATGCAAAGGCCCTCAAGTTTTGAGAAAGGTTGAAGGTTGGTGACTGCATCATTAACATTGTGTACCCGGTAGTTGCAGGCCCAACTTACATGGCTGTTGTTTTGTCTCACAGCCTGCATTCCCCATTCCATTGGTTTTATGTGGTAGGCATGGGAGCGCATTGAATGACATGTTGGACAGGTGCCATCCACACAGTTTGACACAGCTGATTGTCATTCCTCACTGTCACTCAAGCGTGTCACTGGGTCTAGGTGTGCATGGTTCTTGCCTAAGTGTGCCTGGCATTAATCTAGGCGTACCTGGCCCTTGCCTTGCTGCGACTGGCCCTTGTTGCCTGGCCCACACGTACAACCCATCTAAAATACCTGACCATAACTGATAGTTGTTCATTCAGTTTTCTCATTGTCATGTCGCCATTGGCAGCTATTTATTGCAGTCATTTATAGTTCTCTACAAAAAACAAAGACTGTTTTATATAGCAAAGATGTCCTGCACCTTTTGGTTACTAAAACTATCTCACGCCTTCCAGTCTTTCAACATTCCTGAAATTTCAAGAAAACAATACTGTCAATGAAATTATAATAGTTACAGTAAACATTTTAAGAATGTTTTATCCGTACTTAATACGCCTGACTTTACTCTGGATTTAGTGTGGTTTGCATGAGGCAAAAGAGTTCTTTTCCATACACGGTGTAATTATGTGCCTGTCTTGTGAATGTTATATATACCCCCGTCTGCAGTGCATTACGTGCCCTGTGGGTTCCTCTGTCCTCTGCTCACATAGACCGATTTATCCCTATCACCTATAGTTTTTCTGCTTTAGACACAGTCTATAGTGTTTTTTGCGGAGTGCTATTACAGGAATTAATAGCATGCTACCGACGTCAAGACTGTCTGTGTGGGTCATGCCACCAGACATGAGTCACCCAGTGGCGGAGCGGTGCACTGAGGTAGTTTATTCCCTCTCCCATTGCTTTCTAGAGCAACTCTCATAAAAAAGGACATTGTCCCCTGTTCGCAAGGGCAATGTAGAATTGTGTTTACAGAGTTGGTCTCAGTTGAGTGATTCCTCGTTCAAATCCTCCTACTGCTGTGTCGAACATTGGGCAAGTTTGTTCACTCCACATTCCTTCAGTTAACTCAGCTGTATGAATGAGTACCTGGCTATAGACAATGGTGGATATTTGTGTAGTAATTGTGGTGTGGCTGAATATTTCCCAGGGAAGTTGAAAATGTGTTCAATTGAACAGGCCTGCCAGGCAGTAAAGTATTAAGGCATTTTGAGCAGTCCTAGTGGCTTGATACCATGCTGTATTAAAACTTACCTTTACCTTTATTCCCCCCACTGAAATTAATAGGCAAACATTTCCCTTATTATTCTTTTTAGGGAAGACCCCATTGAAACTGCTTCGATCTGACATCACAGAGACCACTTTGCATTTTACTATTAATTAATTAATAAATAAGTAACTACAACATATTTCCTTGTAGTAAATATATCAATCGGGGTAACGTGTGCCTGTTCATATTTCATAGATTTTGCCTGTCCTCTATTTTGATCAGAACCTTGCGCACTGCTAAATCAGTTCTAGATGCTTGGCTATATTCAGTCTTTGGTATGCAGCAGTAGAAGTGAAGTTGTCCAGATATATCCAGCCCCTGTTGGTCTGTTATATTAAGTTCCTGCTGTTGCGCCACATTCAGCCCCTGTTGATCACCTACATTCAGTCCTCATTGCTCAATGCAACTGTAACTTCTTTACAACTATTGAGAGTTTGCCTTAAAAGTGACGTGTTCAGATGTGACCAGTGAACCACATATTAAATCGCCACTGCCTTCCCACTCTGCCATGAGCCTACAGTAGCTGTCTGGGTCATGTCCCATCAATTTTGTGATTTTTACATAAATGCCTAGGTTATAATCTCATCTTTCATTGTCCACTTTATTTTCCTTAACAAATAATCCCAAACTATTAAAATGCTGGTGTTTACATTTACGAATCCACGTGAACACATGTGACTCATCTTAACAAAATGAGTCGGATGTCGGCAAATTTGATTTTCCATAAATGCCGTTTATGTGAACAAATCGCGAATCCATCGATTTTGAGATTTCCCCTGACAATTATTCTTTGGTATTCGTTTTATCAATTGCTACTCTAGCTACCCACTAATTAACTCTGTTTTGTGTATTTTAAAGCGATTTTTGTAGAGCTGTGCGAAGTGTTCCGCTCGATTTCCTTAAAATAACGCCGAAAATGCCAGTAATTGCGCACGTTTGCAACTGCTAATTTTGGGACGCTCCTAACATATGGGATATCACCACGAAGCTTGACGCGTCATCTTCCCATATATGGGCATACATATGTTAATAACTACATTCTGTGACCTCCAGAGAGCTTGGAAGACGGTAACTAAGGTACATTTCATGAAACAACGAATAATTTGCATCAACTTTGACGGCTGTTTTCTGGGTTTGAAGGTTTCTATCCCACATGTGTTTGTTAAGCCATAACTTAAGTTAGAATTAAGATATCTTCTTACAAGATACACCGTGTGAAAGCAGAGATTCTGCTCTTTCCAATGCTACTAATAACTCAATATTAAACATTTCTGACATGCGACTCATTTTGTTAAAATGGGTCACATATAGATGATATGAGCCAGAAGGACCTCATTTTTCAAAATGTCACTTAAAAATATTGAGCACTACAATTTTAGCAATCAATTAAAAACTACTGAATATATTTCAACGAATGAGCTGTGGAATTGAAAAAAGTACAAAACTTAATTTTTTTACTAATTTTCACTTAAATCCCACATTGCAGTGACAGGTTAGAAAATTAATGAACATTTCTGCTGAACGTCTTGTGACCATCCAGTGGGCAGTGTGTAAAGTATGGCTGTATATGTTTGCAGGTTACACGTCGTCCTGTCATTGGTGGAGTGTTGTGTTTGCAGGTTACACGTCGTCCTGTCATTGGTGGAGTATTGTGTTTGTAGGTTACTCATTGTCCTGTCATTGGTGGAGTGTTGTGTTTGCAGGTTACACGTCGTCCTGTGATTCATGGAGTGTTGTGTTTGCAGGTTACATGTCGTTCTGTCATTGGTGGAGTGTTGTGTTTGCAGGTTACTCATCGTCCTGTGATTCACGGAGTGTTGTGTTTGCAGGTTACACGTCGTCCTGTGATTGGTGGAGTGTTGTGTTTGCAGGTTACATGTCTTCCTGTGATTCATGGAGTGTTGTGTTTGCAGGTTACACGTCGTCCTGTGATTGGTGGAGTGTTGGGGTGATCCTCTATGAGATGTTGGTCGGTCAACCGCCATTCCTCGCCCAGCAGCCACATGAGACACAGATGAAGGTGCGTAATATTAATAGATTATCCATATGTAATTTATAATGCAGAAAAACGTTTCAACAGACCATTGAAGTTATAAATTAATTATGTTAAAGAGAGGTTTTCTGTTTATTTTTATTCTAAAATCATGTTATAGTATGAACTGTTTGTTTGCTAACAGACTGACTGCCTAGATATGTTTAATGAAACATAAACAACTTTTGAATTCAACAGTTCAATTTTGAAAACAAATCGGTGTCTGTCGCTCAAATGCCTGAAGGTCGTGACCCAATGGGGAGAACAATTAATGCTAAAAAAACCTATCTAGAGTATCTGGGTTCAAATCCTCTTCCTGTCATCTTGGGCAAGTTTGTAATGGTGGATATGTGTACAAATAGTCTTTGCACATTTTTTGCACAGTAGCTGAATGCTTCCCAGAGAAGTCAAGATGGTGTTCAAATGAACGGGTCTGTCAGGGAATAAACTCACTGAAGTATAAACCACTTTGAGCTGAACTTAGGACCCAATACTTCACTACATAAGAATATACCTTTTTAGTGACGACTATTTCTGTTTTACGCAGGTCATCAGCTGGGAGTCGAGTCTACGGATCCCCGAGGAAGCAAACCTGTCTCCAGCAGCAGGCAACCTGATCCTGCGGCTGTGCTGTGGCCCTGAGGAGCGTCTCGGATGCTCCGGAGCGCAGGAGGTGAAGGCACATCCGTTTTTCGCAGACATCAACATCGCTGGCCTTCGCCAACAGGCGGCGCTGCACATACCAAAAATCCGACACGCAACTGACACTTCAAACTTTGACTCGGTCAACTATGACGAGCCGCACGATTCAGCATCGGATGACTCGTCAAAGAAGGAACCGGCCGGGGAAAATGGGAAGCACCCGGAGCACGCATTCCTCGAGTTCACGTTTCGACGCTTCTTCGATGATGGCGGACATTTTGTCGCAAGCAAAATGCAGGATCCCGAGACGAACAGTCCCATATTTGTATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050236	Family	Serine/threonine-protein kinases, AGC	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24356	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000082	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0035329	Biological Process	hippo signaling	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0043065	Biological Process	positive regulation of apoptotic process	Interproscan
GO:0046620	Biological Process	regulation of organ growth	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf12099_1.7 global RNA-seq network