Detailed information of PE_Scaf12088_5.10 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12088_5.10SYNTAXINSuperscaffold82412190324141938-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05739SNARESNARE domainFamilyInterproscan
PF11416Syntaxin-5_NSyntaxin-5 N-terminal, Sly1p-binding domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000727DomainTarget SNARE coiled-coil homology domainInterproscan
IPR006012Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR010989Homologous_superfamilySNAREInterproscan
IPR021538DomainSyntaxin-5, N-terminal, Sly1p-binding domainInterproscan
IPR045242FamilySyntaxinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19957SYNTAXINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0005484Molecular FunctionSNAP receptor activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006906Biological Processvesicle fusionInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0031201Cellular ComponentSNARE complexInterproscan
GO:0048278Biological Processvesicle dockingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12088_5.10 global RNA-seq network
TOP