| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| PE_Scaf12037_4.3 | 5'->3' EXORIBONUCLEASE | Superscaffold8 | 4736496 | 4784818 | + |
| CDS | |||||
| PE_Scaf12037_4.3 | |||||
| Transcript |
| PE_Scaf12037_4.3 |
| Protein |
| PE_Scaf12037_4.3 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03159 | XRN_N | XRN 5'-3' exonuclease N-terminus | Family | Interproscan |
| PF17846 | XRN_M | Xrn1 helical domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004859 | Domain | Xrn1, N-terminal | Interproscan |
| IPR017151 | Family | 5'-3' exoribonuclease type 2 | Interproscan |
| IPR027073 | Family | 5'-3' exoribonuclease | Interproscan |
| IPR041412 | Domain | Xrn1, helical domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12341 | 5'->3' EXORIBONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0004527 | Molecular Function | exonuclease activity | Interproscan |
| GO:0004534 | Molecular Function | 5'-3' RNA exonuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for PE_Scaf12037_4.3 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
