Detailed information of PE_Scaf12027_8.6 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf12027_8.6LUPUS LA PROTEIN-RELATEDSuperscaffold134566488745709189-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05383LaLa domainDomainInterproscan
PF21071LARP1_HEATLARP1 HEAT repeat regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006607RepeatLARP1-like, DM15 repeatInterproscan
IPR006630DomainLa-type HTH domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR045180FamilyLa domain containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22792LUPUS LA PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0010494Cellular Componentcytoplasmic stress granuleInterproscan
GO:0045727Biological Processpositive regulation of translationInterproscan
GO:0048255Biological ProcessmRNA stabilizationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf12027_8.6 global RNA-seq network
TOP