Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
PE_Scaf11821_0.7 | VACUOLAR PROTEIN SORTING VPS16 | Superscaffold12 | 59216384 | 59234184 | - |
CDS | |||||
PE_Scaf11821_0.7 | |||||
Transcript |
PE_Scaf11821_0.7 |
Protein |
PE_Scaf11821_0.7 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF04840 | Vps16_C | Vps16, C-terminal region | Repeat | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR006925 | Domain | Vps16, C-terminal | Interproscan |
IPR016534 | Family | Vacuolar protein sorting-associated protein 16 | Interproscan |
IPR038132 | Homologous_superfamily | Vps16, C-terminal domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12811 | VACUOLAR PROTEIN SORTING VPS16 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003779 | Molecular Function | actin binding | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0005765 | Cellular Component | lysosomal membrane | Interproscan |
GO:0005768 | Cellular Component | endosome | Interproscan |
GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
GO:0007033 | Biological Process | vacuole organization | Interproscan |
GO:0016197 | Biological Process | endosomal transport | Interproscan |
GO:0030897 | Cellular Component | HOPS complex | Interproscan |
GO:0042144 | Biological Process | vacuole fusion, non-autophagic | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |
1. Expression trend for PE_Scaf11821_0.7 global RNA-seq network |