Detailed information of PE_Scaf11629_11.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11629_11.5E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATEDSuperscaffold83357705933592787+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00622SPRYSPRY domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003649DomainB-box, C-terminalInterproscan
IPR003877DomainSPRY domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017903DomainCOS domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR050617FamilyE3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteinsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24099E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11629_11.5 global RNA-seq network
TOP