Detailed information of PE_Scaf11628_4.2 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf11628_4.2CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Superscaffold371979497238133+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000082DomainSEA domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR003886DomainNIDO domainInterproscan
IPR005533DomainAMOP domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf11628_4.2 global RNA-seq network
TOP