Gene detail

Detailed information of PE_Scaf11563_1.3 in Paraescarpia echinospica Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
PE_Scaf11563_1.3	DUAL SPECIFICITY PROTEIN PHOSPHATASE	Superscaffold5	10287022	10293449	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

PE_Scaf11563_1.3

ATGTTGGCTGTTGAGTGCACTGAGGGCTTCCGTGGGGTAAGCGTGGCCGGCCGGTTCTATATCCAGGAGCAGGCGGTAATGCGGGCAGGTAGGAGCCGACGGCGAGTGGCTTGTCGTGGGCGACTATATTTGCCACAGGACGAGTCATCCCGGTTCGGGCGCCACTGAACTAGAAATCCGACGGAATCACGAAAGCATCGTCGTATTTCTCGGAGCGTTCAGGAGAAGTGGTCGTGTTGTGCTCCATATTCCCGTGTTGGTCGATATCTTTCGCACTTTATTAATAGAGCGACAGCAGAAACGTGACTGCATCGGGTGAGTAGCTGCTTAATTGCTTTCCTTCCGTTGAATGTCCAGTCAGGTATAAATAGGTAGACGGTCAGAAGATGATCGCTACATCACGTGTTGTGTATTGACACGATCATTTCATAACACGTTGAATCTGAACGTTCGCGGACAACAATCCTTCATGAGAACAGGAAAGCAGACTATTAAAAGTAGCACTAATTTGTTTCGAAAGTATTACATACATGTCGCATTTCTCTATTTGATGAACACATGTGAGTTTATGCTTCAGTTAACAAAGATACAAAACACATAATAATTTATATAATATAGACTCTACAGCAAGTTGAGTTTACGAAAAGCTGAAGGTAGAATCCTGGTGCAAGTATTACATAAACAGTTGGTACTCAGTAGGTCAGAGCAACACGCTAATAGAGTTGGCAAGAACAACATAGTCTGGAATATACCACCTGGCGTGACCAGATGCTAGCTAGGCTATGGACTAATTAGGGACATGTTGACCATACCGCAAACCGGAATACAGTTCTCGTTGTAAACAACAAAGTTAGTATCACGAGATGAGAGTAAAATAGCAATCGAGATTGTGTTCATGTATTTCACGGAGGCATGCATGTGTGATTTTGTTTAGATATCAAATAAATTATGTAGGAATAACCGGTCTTGTTGAATATATTTACATTAGTAGATAACCTTGTTTATCCACGTAATCCCTACTATCAATCCGACTCAATATAAAAGTGTCTTATGATTATGTCATCGGAGTACACTAAGAACCACCGATGTAAACAAAGCATGCGGTCCTGAGAATATATCAGGTGTAATCCTTAGGGAATGTGCTGCCGAATTAGCAGGTCCACTAACTATGCTTTTTAATATGTCCTTAAACTGTAGAACTTTTCCAACTTGTTTTAAAAGAGCAAATGTTGTTCCTGTGTACAAGAAGGGGGATAAACGAAATGTGTGCAACTACAGACCTATCTCTCTCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCGCTATTTAGCAAAGTTGTATACGACTCATTGTATGAGCATGTGCGTAACACAATTTCGGTCAGCCAACACGGATTTGTGAGGCGTAGAAGTACAGTATATAATCTAGCGTGTTACTTTAACACCATTTCTGAATCTATTGACAACAAGAAATAGGTTGATTCTGTTTATTTGGATTTCAAGAAAAGCCTTTGGTTCAGTATGCCACCCATTGTTAATTCACAAGCTTAGATCATACGGCTATTCCGGGCAATGCATAGAGTGGTTGCAGTCTTACCTTGTCAACCAAAAACAACGCGTGGTCCTCGAAGGCAAAACATCTGACTGGAAGCCAATGTTGTCTGGTGTACCACAAGGTTCACGAATTGGACCACTTCTGTTTATCTTGTATATTAACGATCTCATTAATCATGTTGATTCATGTGAAATGTCATTGTATGCTGATTATTCCAAATTGTTTCAAGAAATTACGTCGGTGACCGATTGTCAGTTGGTGCAGAAGGATCTGGACAGTGTATGTCTTTGGTGTGAGACATGGCACCTTAAACTTAAAGTTGAGAAATTATGCATAATGTCATTCACTAACAAAAAAGAAACGTATATCCTATGACTACACAATTTTAAGCCAGTGTCTGCCCAAGGTCACCGCTGTCAAAGATCTCGGTATCACATTGACCAACAGTTTGACTTTTAAAGATCATATTAATCGTTGTGTTTGTAAAGCTTTTAAGATGAGTGGTTTTTTAAGCGCGTTTGCACAACATTTACCGATGTACAGGCTTTGCGATCCTTGTATATATATATCTAGTCAGAAGCAAGTTGGAGTATTGCAGTGTTATCTGGAATCCCTGGCAACGTACGTTTATTGACAAAATCGAACGAGTTCAAAAGAAATTTATTAAATATCTATGTTACAAATCCAAAATACAGTACTCCTCCGACAGTTATCCTGAGCTTTGCCATCGTAGGCAAGTTGCAGATCTTATGTTTTTACACAAGTATGTGCACTCCCAACTAGACTCGTCGTATCTGGTAGGGGCTATCCAATTTCACTGTCCTTCACGATCTCTACGAAACTACATCCCTTTTAGAGTTTCCAATAACAGAATAAACATTAGAAAAATCTGTGTTTTGAACAGATGTATGACTACTTTCAACACATTGTATTTAAGTGATCCAACTTGTGATATATATTCAGGAGATGAACCATTTACATCCTCAATTCAAAAACATTTCTATGTATAACAGATGTTTGCCTGGTATATTTGATGTTGATATTGTGTGGTTTTATGTCCTTATTGTTCTTATTGTTTTTATTATTCTATTATTGTTTTATTATTTATACGTATTTTTTCAGTTATCAGTCCTGTTACTGGGTCCACTGGACCTGTTGGAATCTGAATAAATACAATACAATATCAGTAAGCGAGAGCGGTGTCAATTGCACAATAATGTAATTAAAACATCAGCAGTTCGCAAAGCCGGTTTTAATTTATGTTATTCTCTTATCGTAATACACGTTGTTTTCCCAAAATCTATTTAAGTACGCTAACACCGGTGCAACATATAAAGACACATGTTTAGGAGACACGTATTTATTGTTGAATGTTTAAACCTTCAGCTTGGCGATTAAGCTCAGATTGACTAGCATGGCGTCACTGCGTCGATTCTGACGAAATACCAGACTCCATCAACGGCGCGCTATCAGACTGACATATGTTTTCGTTAAGTTGTTTTCTAACGGGTATTACTCATCTTCATGCCTGTGCTATAGAAGGCGGCGTGTTGTTGCTGTGACTGCGAGCATATACATCATCGATGGACGGGTTATCTGACCGCGAAGCTGAGCGGGAGTACCTGCAGAAGATGAAGACGATACTGCTCCGACGGGGCGGTGCGAGCAGCTCTAGCGGTCCGGCTCAACTCCTCGAGTATCTGTACATCGGCAACAAGACGGACGCGTGTAGCAGCTCCGTCTTACGGCGCCACAAGGTGTGTTTGTTTGTGTGTATGTGTGTGTGTGTGCTGGCGTGTATGTGCCTGTACACGTACGTGTATATTTATGTGATAATTTACTTCCGCCCGAAACACATATTCCAGATGCTAAAGAAAGAGCGAAATCTGTGAATTACAATTGTTAATTACTGTGAACCATTGTCGTTATTGTCAACATCTGTGTTTTTGCAACCAATAACCATTACATTACAAACATATACCGTTACTCTAAAACTGTATACATGCATGCATTGCGATTGTTGCATGTTGTACGGACAAATTGTCTTTACACGGTTATCATCGGTGATTCCTTGCTCTAACGATGACTCTTTCTTGTCCCTGTTCACGATTCTGCCTAATGATTTTTGCATGTTGCGCCTATGCGCTCAGGTTCCTGGGTATATTGGCGCTAAAGAAGTTTATTATTATTTGTAATAATAATGATAATAATTCTTTGGTGTCAATATCCACGGCAAGTCCAGCTCAGAAGCTGAACAAAATCAAACGAATGGGCGTTTTCGTGAGCTTGCTGCAAGTCGCAACAATACAAAATCCCTGTGTAAAGAGAGCATTCCATTATGACTGCTGCCCTCAATACATCCGATGTCGTGCCCCTAGATTACCCACGTGTTGAACTGCGCAGCGACCAAGGACTACTCGGTGGAGCTAGTGGACAACCCATATGACTCTGAGACGACGGGTGTACACGACTACCTTGAGTTCGAGGCGCTCGACAACGAGTCGTACCCCATCCTCATGCACTTCCGGAAGGCGAAGGCATTCATCGACGCCGCTCGGGACCAGGTCTGTAACACGGCATGTCAGTGTCTTCTTCTCTCCCTAAGCTCATAGGCATGGGAACATTGGGTAAGGGGCAGCTGCCCCCAGGAATTTCGCTAGGGGGCAGACATACGGTTCTTCCCCCAGTAAATATGAGCGTGAATTTGTTTTGGCGAGCCTCAAGAGGGGTGCAAATTGAGGTTTTATGAGAGGTAGTCTTTTTTGCGAGTGTCAAGGGGGTGCTATTTAAGGCTTGGAGCTTTCTGGTGAGCTTCAGAAATGTTGAACGTTGCCGCGAAACTATTCAATAGAACAGCATCCCCGCTTTCCGATATCATGATCCGACAGCTGTCATAGGAGTGGTGCTGAAGCTCCGGCTCTCAGCTCCCCGATATATTAATTTCGTTCCTGCGCCAATACCTCTTCGATGATTTTCCATTCTTGGTTATTCACCTGCCCACCAAAGGTTCCATTTCTTGCTGTCATTCCATCTTTGCCTTTGTCTTCCTCTTCGTCGTTTGTCACCATTTTCTGCTTTCCATGCTATTTTGACAGTTTGTCTTTGTTCATTCTTTGCACGTGTCCTGCCCATCTCATTGTGTGTCCGACTACTTTCATCTTTAGATGTTTTTCACGCCAATTTTGTTTCTTTTTTTCTCAATTCCCTCATCTTCTTTCTATCCACTCGGGTTACTTCAATGGTTGTTCTAATAATTTACATGTCCATCATGTAACCTATTTCCTAGCAACATGTCCTTGACGCTATCAAAATGGATGCCGAACACGTGGAGCGTTTGGACATTCCGTCGTATATTTTGCTTAAATTATCAGGCCCCAGACGTATTTCTTTATGGTAAAACATAAGGTATATGTTCTACAGCGACACCTGTATGCGGCAATGTTTGAGCTAGAAGATGCCATGCAGCACCAGAATCTTGACGGAGGTGACACGCGTACTGTGGATTGTGATATAGGCAAACCGCGACGTCCTGGATCCACCAGTTAATTCAGACAGATAACATCGCGGTGGTTCGGACATATGTTGTGTAGAGTGGCAGCTTTTGCGACCTAGAAGGCGTAGAGACAGAAGAAGAAGACAGCACCGGATGGTTATTAGACATGTAGTGAGGGGGAGACGAGGAGGTGAAAATGAAGTCGGGGAAATGTAAAGGCTATGGTGACCTTAATATAAAATTCCACTGTATAAATTTATCATCTGCAAACAAGCTATCTGACTGGTTTGAATGTTTGATTGGTTGATTTATTTATTGATCCATCTAATTATCTGTACAGGGCGGCCGCGTTCTCGTGCACTGCAACATGGGAGTGAACCGTAGTGGCGCCATCTGCGTCGCCTACATCATGGAACACAAGCAGATAACGTTGTTACAGACGATACGCCTGGTCAAGTTCGAACGTCCGATCATCTTATGTAACGAGGGCTTCCAGAAGCAGCTCATCCAGTTCGCGCGCAACCACCAACTTCTTCACCGGAAGTCGAAGATTGGCGCCATCTAGTGATTGCATCTAGGGCAAACATTTCGCTATGTATAGTATTGTGTACAGCGGGCTTCACGGTGATGTTGGGGAACTGAGTCCCACACATGTTGGCACTCCGCAGAATCTGATTGCAATGTTCACGCACAAAATGAACCATGAATTAAACAGTTAATGCTACTATCCTTACTGTATGTCTATCATCAAGTGTAAATAAATGTAGTTCTCAAATGCACTGTGTAAATAATGCGGTCTTTCATAATAGCTGAACGTCACGAGATCCAATCGAATTTTAGGTATCCACTTCTTGTTAGCGTTGTATTCATCATTATAGATTTTGTTGAAGTTATTTAAAAAAAAACTCGCAATGAGCAACATTGTCCATAATGACAACATTGGCCCATTTCTACGCCCTAAGACAAGCACCGTACGCTAAAAAGAAACCCCAAATACTGCAACCCTCAACTGTTCATTTTCTTGCGGTAACATTCGGAAACAAGCCTAATTCAGCCGACATCACTTGTAACCAAACCTCAGAAACAGGATCGATACAGGGCTCAGCATAGCGTTA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000340	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR020422	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10159	DUAL SPECIFICITY PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0008330	Molecular Function	protein tyrosine/threonine phosphatase activity	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0017017	Molecular Function	MAP kinase tyrosine/serine/threonine phosphatase activity	Interproscan
GO:0033550	Molecular Function	MAP kinase tyrosine phosphatase activity	Interproscan
GO:0043409	Biological Process	negative regulation of MAPK cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for PE_Scaf11563_1.3 global RNA-seq network