Detailed information of PE_Scaf1119_18.5 in Paraescarpia echinospica Gene info
Gene IDAnnotationChromosomeStartEndStrand
PE_Scaf1119_18.5PROTEIN BARK BEETLESuperscaffold11074862510813201-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01833TIGIPT/TIG domainDomainInterproscan
PF05270AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000001DomainKringleInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR002909DomainIPT domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR007934DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR036195Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0046373Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for PE_Scaf1119_18.5 global RNA-seq network
TOP